RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CYFIP1Q7L576 1253 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 KRT25Q7Z3Z0 450 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 SPATA33Q96N06 139 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 MBOAT7Q96N66 472 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 GPR20Q99678 358 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 C16orf70Q9BSU1 422 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 MTG1Q9BT17 334 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-204ENST00000563130 MLXIPQ9HAP2 919 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 AGO4Q9HCK5 861 aaKnown RBP7.04□□□□□ -1.28
CNOT1-204ENST00000563130 TELO2Q9Y4R8 837 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 NFASCO94856 1347 aa7.04□□□□□ -1.28
CNOT1-204ENST00000563130 MYH7BA7E2Y1 1941 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 A0A0U1RQG5 324 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 HAS3O00219 553 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 DHX15O43143 795 aaKnown RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 F2P00734 622 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 NR5A1Q13285 461 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 ITGB3BPQ13352 177 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 CUL4AQ13619 759 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 ITGA7Q13683 1181 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 NONOQ15233 471 aaKnown RBP eCLIP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 EARS2Q5JPH6 523 aaKnown RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 MOXD1Q6UVY6 613 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 NR2E3Q9Y5X4 410 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 GSTTP1A0A1W2PQM5 241 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 RNF40O75150 1001 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 CD4P01730 458 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 MYL3P08590 195 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 KRT2P35908 639 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 ZNF76P36508 570 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 PSMC6P62333 389 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 TLE2Q04725 743 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 FAAP100Q0VG06 881 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 INF2Q27J81 1249 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 Q4G0T1 1027 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 SESTD1Q86VW0 696 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 PLA2G4DQ86XP0 818 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 DIS3L2Q8IYB7 885 aaKnown RBP7.03□□□□□ -1.28
CNOT1-204ENST00000563130 SNX21Q969T3 373 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 MROH7Q68CQ1 1323 aa7.03□□□□□ -1.28
CNOT1-204ENST00000563130 CCDC194A0A1B0GVG4 234 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 H0YGN5 161 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 IPO5O00410 1097 aaKnown RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 SORBS3O60504 671 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 ATG7O95352 703 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 TDP2O95551 362 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 LGALS2P05162 132 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PTPN11Q06124 597 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 NBPF20Q3BBV1 942 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PRR16Q569H4 304 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PIK3AP1Q6ZUJ8 805 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 C7orf61Q8IZ16 206 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 SEPT1Q8WYJ6 367 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 C8orf76Q96K31 380 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 JPH1Q9HDC5 661 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PDLIM7Q9NR12 457 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 ATP11BQ9Y2G3 1177 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 H3BRB1 525 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 MSH4O15457 936 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 CCNE2O96020 404 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 ZNF286BP0CG31 522 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 HOXC8P31273 242 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 TRIM29Q14134 588 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 B3GNT9Q6UX72 402 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 NEK8Q86SG6 692 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 FAM184AQ8NB25 1140 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 CTAGE1Q96RT6 745 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 KATNAL1Q9BW62 490 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 FOXP1Q9H334 677 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 TUT1Q9H6E5 874 aaKnown RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 PKD2L1Q9P0L9 805 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 SLC9A2Q9UBY0 812 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 TBX21Q9UL17 535 aa7.02□□□□□ -1.29
CNOT1-204ENST00000563130 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-204ENST00000563130 DOCK5Q9H7D0 1870 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 TRIM43BA6NCK2 446 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 KIAA0355O15063 1070 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 B4GALT4O60513 344 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 PQBP1O60828 265 aaKnown RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 LGR5O75473 907 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 CLTBP09497 229 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 GCFC2P16383 781 aaKnown RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 U2AF2P26368 475 aaKnown RBP eCLIP7.01□□□□□ -1.296e-7■■□□□ 12.7
CNOT1-204ENST00000563130 GJB2P29033 226 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 TCF7P36402 384 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms