RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 DDX53Q86TM3 631 aaKnown RBP8.71□□□□□ -1.02
SMG1-204ENST00000561940 SAPCD2Q86UD0 394 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 OSTM1Q86WC4 334 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 NXPE1Q8N323 547 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 CISD2Q8N5K1 135 aaKnown RBP8.71□□□□□ -1.02
SMG1-204ENST00000561940 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
SMG1-204ENST00000561940 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 FBXW5Q969U6 566 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 ZSWIM3Q96MP5 696 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 CBLCQ9ULV8 474 aa8.71□□□□□ -1.02
SMG1-204ENST00000561940 CCDC66A2RUB6 948 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 CBX4O00257 560 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 KCNK3O14649 394 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ID4P47928 161 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ITGA1P56199 1179 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ST5P78524 1137 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 DLX2Q07687 328 aaPredicted RBP8.7□□□□□ -1.02
SMG1-204ENST00000561940 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 TMC5Q6UXY8 1006 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ARHGAP36Q6ZRI8 547 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 TRIM48Q8IWZ4 208 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ZDHHC14Q8IZN3 488 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 ATL2Q8NHH9 583 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 UHMK1Q8TAS1 419 aaKnown RBP8.7□□□□□ -1.02
SMG1-204ENST00000561940 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 MCM8Q9UJA3 840 aa8.7□□□□□ -1.02
SMG1-204ENST00000561940 TRAF5O00463 557 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 INHBBP09529 407 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 PDE6AP16499 860 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 HABP4Q5JVS0 413 aaKnown RBP8.69□□□□□ -1.02
SMG1-204ENST00000561940 PHF19Q5T6S3 580 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 LCE1DQ5T752 114 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 OVCH1Q7RTY7 1134 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 FEZF2Q8TBJ5 459 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 SH3RF2Q8TEC5 729 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
SMG1-204ENST00000561940 WASF3Q9UPY6 502 aa8.69□□□□□ -1.02
SMG1-204ENST00000561940 WNT9AO14904 365 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 NPTXRO95502 500 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 PDGFRBP09619 1106 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 DHCR24Q15392 516 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 CYP4F22Q6NT55 531 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 PTRH1Q86Y79 214 aaKnown RBP8.68□□□□□ -1.02
SMG1-204ENST00000561940 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 KYQ8NBH2 561 aa8.68□□□□□ -1.02
SMG1-204ENST00000561940 NEMP1O14524 444 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 APPP05067 770 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 MECP2P51608 486 aaKnown RBP8.67□□□□□ -1.02
SMG1-204ENST00000561940 SLURP1P55000 103 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 JAM2P57087 298 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 DSG1Q02413 1049 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 STAT4Q14765 748 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 PAN2Q504Q3 1202 aaKnown RBP8.67□□□□□ -1.02
SMG1-204ENST00000561940 BRDTQ58F21 947 aaPredicted RBP8.67□□□□□ -1.02
SMG1-204ENST00000561940 LIPIQ6XZB0 460 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 TTLL7Q6ZT98 887 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 KCTD1Q719H9 257 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.67□□□□□ -1.02
SMG1-204ENST00000561940 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 KCNC2Q96PR1 638 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 ORAI3Q9BRQ5 295 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 PARD6AQ9NPB6 346 aa8.67□□□□□ -1.02
SMG1-204ENST00000561940 NGRNQ9NPE2 291 aaKnown RBP8.67□□□□□ -1.02
SMG1-204ENST00000561940 SASH1O94885 1247 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 AMY2AP04746 511 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 BPIP17213 487 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 AMY2BP19961 511 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 ADAM9Q13443 819 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 GPR19Q15760 415 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 CRY1Q16526 586 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 EP400NLQ6ZTU2 488 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 CHST14Q8NCH0 376 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 OR2W6PQ8NHA6 318 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 USP7Q93009 1102 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG1-204ENST00000561940 CROTQ9UKG9 612 aa8.66□□□□□ -1.02
SMG1-204ENST00000561940 OTOL1A6NHN0 477 aaPredicted RBP8.65□□□□□ -1.02
SMG1-204ENST00000561940 F2P00734 622 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 THBS2P35442 1172 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 ADCYAP1R1P41586 468 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 KCNC1P48547 511 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.02
SMG1-204ENST00000561940 SCNN1BP51168 640 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 TMPRSS15P98073 1019 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 CAP1Q01518 475 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 FSTL4Q6MZW2 842 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 CARFQ8N187 725 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 PCDH18Q9HCL0 1135 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 TYW1Q9NV66 732 aaKnown RBP8.65□□□□□ -1.02
SMG1-204ENST00000561940 NTMQ9P121 344 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.02
SMG1-204ENST00000561940 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 SH3D21A4FU49 640 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 ACOT7O00154 380 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 MAN2B1O00754 1011 aa8.64□□□□□ -1.03
SMG1-204ENST00000561940 GPR39O43194 453 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms