RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 MAN1B1Q9UKM7 699 aa8.44□□□□□ -1.06
TPM1-231ENST00000561395 ZNF214Q9UL59 606 aaPredicted RBP8.44□□□□□ -1.06
TPM1-231ENST00000561395 ARIH1Q9Y4X5 557 aaPredicted RBP8.44□□□□□ -1.06
TPM1-231ENST00000561395 IGLV3-22A0A075B6J6 115 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 POTEMA6NI47 508 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 DNM1LO00429 736 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 SLC26A4O43511 780 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 MARCH6O60337 910 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 PEX10O60683 326 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 BMP6P22004 513 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 ZNF76P36508 570 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 GRB10Q13322 594 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 MORC3Q14149 939 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 TMEM132BQ14DG7 1078 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 TMEM119Q4V9L6 283 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 SNRNP48Q6IEG0 339 aaKnown RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 SLC30A10Q6XR72 485 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 DHX40Q8IX18 779 aaKnown RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 USP6NLQ92738 828 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 GJA10Q969M2 543 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 CALML4Q96GE6 196 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 PDLIM2Q96JY6 352 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 FAM20AQ96MK3 541 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 PPP1R9BQ96SB3 815 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 GAS2L1Q99501 681 aaPredicted RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 MTRQ99707 1265 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 TEX13BQ9BXU2 312 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 MAF1Q9H063 256 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 TXNRD2Q9NNW7 524 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 PDLIM7Q9NR12 457 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 RNF146Q9NTX7 359 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 HOXC10Q9NYD6 342 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 DDX20Q9UHI6 824 aaKnown RBP8.43□□□□□ -1.06
TPM1-231ENST00000561395 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 KDM3AQ9Y4C1 1321 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 CHD7Q9P2D1 2997 aa8.43□□□□□ -1.06
TPM1-231ENST00000561395 MSH4O15457 936 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 MSCO60682 206 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 MYL1P05976 194 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 CASP1P29466 404 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 MAPK4P31152 587 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 RPS6P62753 249 aaKnown RBP8.42□□□□□ -1.06
TPM1-231ENST00000561395 MRPS5P82675 430 aaKnown RBP8.42□□□□□ -1.06
TPM1-231ENST00000561395 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
TPM1-231ENST00000561395 SPIRE1Q08AE8 756 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 TRIM60Q495X7 471 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 CEP55Q53EZ4 464 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 HYIQ5T013 277 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 MORN1Q5T089 497 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 KRT79Q5XKE5 535 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 ISM2Q6H9L7 571 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 LBX2Q6XYB7 198 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 NIPA1Q7RTP0 329 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 GPR142Q7Z601 462 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 AOPEPQ8N6M6 819 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 MB21D1Q8N884 522 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 GPRC5AQ8NFJ5 357 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
TPM1-231ENST00000561395 PNMA5Q96PV4 448 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 GSDMAQ96QA5 445 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 PORCNQ9H237 461 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 STK17AQ9UEE5 414 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 VAV3Q9UKW4 847 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 PCDHA12Q9UN75 941 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 RIPK3Q9Y572 518 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 TRANK1O15050 2925 aa8.42□□□□□ -1.06
TPM1-231ENST00000561395 LOXHD1Q8IVV2 1947 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 BECN2A8MW95 431 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 GOLGA6L19H0YKK7 550 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 MEIS1O00470 390 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 AP5Z1O43299 807 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 RPN1P04843 607 aaKnown RBP8.41□□□□□ -1.06
TPM1-231ENST00000561395 CNGA1P29973 690 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 STAT3P40763 770 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 EPHB4P54760 987 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 HERVK_113P62684 666 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 ERVK-24P63145 666 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 CUL4BQ13620 913 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 SNX17Q15036 470 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 ECM1Q16610 540 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 GJC2Q5T442 439 aaPredicted RBP8.41□□□□□ -1.06
TPM1-231ENST00000561395 MFSD14CQ5VZR4 134 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 PCNX4Q63HM2 1172 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 NSMFQ6X4W1 530 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 SLC39A5Q6ZMH5 540 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 RNF207Q6ZRF8 634 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 PLA2G4DQ86XP0 818 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms