RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 LRRC63Q05C16 580 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 NR1I3Q14994 352 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 HERC4Q5GLZ8 1057 aaPredicted RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 RINT1Q6NUQ1 792 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 C1orf186Q6ZWK4 172 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 APTXQ7Z2E3 356 aaKnown RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 VSTM4Q8IW00 320 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 FAM114A1Q8IWE2 563 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 MYOCDQ8IZQ8 938 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 FAM43AQ8N2R8 423 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 TRIM47Q96LD4 638 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 NAP1L5Q96NT1 182 aaPredicted RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 REEP2Q9BRK0 252 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 PCDHA2Q9Y5H9 948 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 COL4A3BPQ9Y5P4 624 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 DNAJC25-GNG10A0A024R161 153 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 SOWAHBA6NEL2 793 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 PDHXO00330 501 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 TBCAO75347 108 aaKnown RBP19.01■□□□□ 0.63
HDDC3-206ENST00000561036 MSNP26038 577 aaKnown RBP19.01■□□□□ 0.63
HDDC3-206ENST00000561036 PSMC5P62195 406 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 KCTD2Q14681 263 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 TCP11X2Q5H9J9 407 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 C4orf19Q8IY42 314 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 BANK1Q8NDB2 785 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 PIGOQ8TEQ8 1089 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 BRI3BPQ8WY22 251 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 MMP19Q99542 508 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 TSG101Q99816 390 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 DUSP9Q99956 384 aaKnown RBP19.01■□□□□ 0.63
HDDC3-206ENST00000561036 SEL1LQ9UBV2 794 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 ODF2LQ9ULJ1 636 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 SAMM50Q9Y512 469 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 PCDHA10Q9Y5I2 948 aa19.01■□□□□ 0.63
HDDC3-206ENST00000561036 NPHP3-ACAD11A0A0J9YXS1 232 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 ARHGEF35A5YM69 484 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 KCNJ18B7U540 433 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 PEX10O60683 326 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 CCNE2O96020 404 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 PTGS1P23219 599 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 GUCY2CP25092 1073 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 PMS1P54277 932 aaKnown RBP19■□□□□ 0.63
HDDC3-206ENST00000561036 KCNJ12Q14500 433 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 Q3C1V9 767 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 ANKRD40Q6AI12 368 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 CSGALNACT2Q8N6G5 542 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 SMCR8Q8TEV9 937 aaPredicted RBP19■□□□□ 0.63
HDDC3-206ENST00000561036 HPS3Q969F9 1004 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 RUSC1Q9BVN2 902 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 TIPINQ9BVW5 301 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 SEMA6BQ9H3T3 888 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 WRAP73Q9P2S5 460 aaPredicted RBP19■□□□□ 0.63
HDDC3-206ENST00000561036 MAGEC2Q9UBF1 373 aaPredicted RBP19■□□□□ 0.63
HDDC3-206ENST00000561036 MORF4L1Q9UBU8 362 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 UTRNP46939 3433 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 ASTN1O14525 1302 aa19■□□□□ 0.63
HDDC3-206ENST00000561036 TRIM49BA6NDI0 452 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 TGFB3P10600 412 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 CCDC144BQ3MJ40 725 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 HSP90AA4PQ58FG1 418 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 CST9Q5W186 159 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 TMC6Q7Z403 805 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 CCDC150Q8NCX0 1101 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 SRRTQ9BXP5 876 aaKnown RBP18.99■□□□□ 0.63
HDDC3-206ENST00000561036 JPH1Q9HDC5 661 aaPredicted RBP18.99■□□□□ 0.63
HDDC3-206ENST00000561036 RTN4Q9NQC3 1192 aaKnown RBP18.99■□□□□ 0.63
HDDC3-206ENST00000561036 OLFML3Q9NRN5 406 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 INTS13Q9NVM9 706 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.99■□□□□ 0.63
HDDC3-206ENST00000561036 SLC9A2Q9UBY0 812 aa18.99■□□□□ 0.63
HDDC3-206ENST00000561036 PSAPP07602 524 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 CYP2C8P10632 490 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 ZNF131P52739 623 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 KRT31Q15323 416 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 KCNV1Q6PIU1 500 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 FILIP1Q7Z7B0 1213 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 IRF2BP1Q8IU81 584 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 ABRAQ8N0Z2 381 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 MORC4Q8TE76 937 aa18.98■□□□□ 0.63
HDDC3-206ENST00000561036 PARK7Q99497 189 aaKnown RBP18.98■□□□□ 0.63
HDDC3-206ENST00000561036 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 FAM13AO94988 1023 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 COPB1P53618 953 aaKnown RBP18.97■□□□□ 0.63
HDDC3-206ENST00000561036 RAD51AP2Q09MP3 1159 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 BMT2Q1RMZ1 405 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 SPECC1LQ69YQ0 1117 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 EPM2AIP1Q7L775 607 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-206ENST00000561036 SFR1Q86XK3 245 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 KCNF1Q9H3M0 494 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 ZHX3Q9H4I2 956 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 PARVGQ9HBI0 331 aa18.97■□□□□ 0.63
HDDC3-206ENST00000561036 ZCCHC17Q9NP64 241 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms