RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SURF1Q15526 300 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 MILR1Q7Z6M3 343 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 KYQ8NBH2 561 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 TTLL11Q8NHH1 800 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 PIP4K2CQ8TBX8 421 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 FBXW5Q969U6 566 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 KLC2Q9H0B6 622 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 TCRBV5S4A2TA0A5A2 114 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 NKRFO15226 690 aaKnown RBP eCLIP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 MAFKO60675 156 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 CDC45O75419 566 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 ICAM4Q14773 271 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 TKFCQ3LXA3 575 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 SH3RF2Q8TEC5 729 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 SYT3Q9BQG1 590 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 CELF4Q9BZC1 486 aaKnown RBP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 CD248Q9HCU0 757 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 PPP4R1LQ9P1A2 415 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
PSMA4-221ENST00000560842 PCDHB4Q9Y5E5 795 aa6.54□□□□□ -1.36
PSMA4-221ENST00000560842 GSTA4O15217 222 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 LAMTOR5O43504 91 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 DNAJC8O75937 253 aaPredicted RBP6.53□□□□□ -1.36
PSMA4-221ENST00000560842 AMHP03971 560 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 GNAT1P11488 350 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 ABHD17CQ6PCB6 329 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 TRIM48Q8IWZ4 208 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 NINJ1Q92982 152 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 FEZ1Q99689 392 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 MYOTQ9UBF9 498 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
PSMA4-221ENST00000560842 ZNF561-AS1K7EIQ3 104 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 ASLP04424 464 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 AMY2AP04746 511 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 PYGMP11217 842 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 COL6A2P12110 1019 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 AMY2BP19961 511 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 SDSP20132 328 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 HSD3B2P26439 372 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 GPR19Q15760 415 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 CR1LQ2VPA4 569 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 FAM47CQ5HY64 1035 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 SDE2Q6IQ49 451 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 ETV3LQ6ZN32 361 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 ZC3H7AQ8IWR0 971 aaKnown RBP6.52□□□□□ -1.37
PSMA4-221ENST00000560842 TTLL6Q8N841 843 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 CLEC4DQ8WXI8 215 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 LCORQ96JN0 433 aaPredicted RBP6.52□□□□□ -1.37
PSMA4-221ENST00000560842 NGRNQ9NPE2 291 aaKnown RBP6.52□□□□□ -1.37
PSMA4-221ENST00000560842 DSEQ9UL01 958 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 TELO2Q9Y4R8 837 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 CD2APQ9Y5K6 639 aa6.52□□□□□ -1.37
PSMA4-221ENST00000560842 CCDC66A2RUB6 948 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 B4E1Z4 1266 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 POU3F2P20265 443 aaPredicted RBP6.51□□□□□ -1.37
PSMA4-221ENST00000560842 IGFALSP35858 605 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 DALRD3Q5D0E6 543 aaKnown RBP6.51□□□□□ -1.37
PSMA4-221ENST00000560842 OVCH1Q7RTY7 1134 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 ORAI3Q9BRQ5 295 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 SMURF1Q9HCE7 757 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 DTLQ9NZJ0 730 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 MAGEC2Q9UBF1 373 aaPredicted RBP6.51□□□□□ -1.37
PSMA4-221ENST00000560842 SRPK3Q9UPE1 567 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 PLAAQ9Y263 795 aa6.51□□□□□ -1.37
PSMA4-221ENST00000560842 FAM83GA6ND36 823 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.372e-21■□□□□ 11.3
PSMA4-221ENST00000560842 SLC27A2O14975 620 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 B4GALT3O60512 393 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 LRG1P02750 347 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 SRGAP2CP0DJJ0 459 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 PDE6AP16499 860 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 MECP2P51608 486 aaKnown RBP6.5□□□□□ -1.37
PSMA4-221ENST00000560842 CRY1Q16526 586 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
PSMA4-221ENST00000560842 ARHGAP36Q6ZRI8 547 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 KCTD1Q719H9 257 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 OTOP1Q7RTM1 612 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 NLGN4XQ8N0W4 816 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 TOE1Q96GM8 510 aaKnown RBP6.5□□□□□ -1.37
PSMA4-221ENST00000560842 CATSPERZQ9NTU4 200 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
PSMA4-221ENST00000560842 MAN2B1O00754 1011 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 GPR42O15529 346 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 JAM2P57087 298 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 ST5P78524 1137 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 KLF10Q13118 480 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 TUSC3Q13454 348 aa6.49□□□□□ -1.37
PSMA4-221ENST00000560842 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms