RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 MCMDC2Q4G0Z9 681 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 PAN2Q504Q3 1202 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 ASPRV1Q53RT3 343 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 MTMR8Q96EF0 704 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 SALL3Q9BXA9 1300 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 CACNA1BQ00975 2339 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 MX1P20591 662 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 SP100P23497 879 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 CD52P31358 61 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 ERVFC1P60507 584 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 NEDD9Q14511 834 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 DUSP6Q16828 381 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 TAF2Q6P1X5 1199 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 METTL7BQ6UX53 244 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 TMEM184AQ6ZMB5 413 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 TSHZ1Q6ZSZ6 1077 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 SAMD3Q8N6K7 520 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 KREMEN2Q8NCW0 462 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 DNAJB3Q8WWF6 145 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 ESR2Q92731 530 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 NEK1Q96PY6 1258 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 KAT14Q9H8E8 782 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 ZNF215Q9UL58 517 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 CDY2AQ9Y6F7 541 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
RABGGTA-217ENST00000560521 BRD1O95696 1058 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 CCDC178Q5BJE1 867 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 MARCH8Q5T0T0 291 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 ZBTB33Q86T24 672 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 NPAS4Q8IUM7 802 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 ENAHQ8N8S7 591 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 NKD2Q969F2 451 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 INPP4AQ96PE3 977 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 ZSCAN10Q96SZ4 725 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 APOL5Q9BWW9 433 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 SMOC2Q9H3U7 446 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 RTEL1Q9NZ71 1219 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 CDH22Q9UJ99 828 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
RABGGTA-217ENST00000560521 MBLAC1A4D2B0 266 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 FSCN2O14926 492 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 ZBTB5O15062 677 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 STAG3L1P0CL83 205 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 ARP10275 920 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 TECP42680 631 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 MRPS6P82932 125 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 SP4Q02446 784 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 UBE3AQ05086 875 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 NMIQ13287 307 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 GRIK4Q16099 956 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 SLC35G1Q2M3R5 365 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 RSPH3Q86UC2 560 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 IQCA1Q86XH1 822 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 UBALD2Q8IYN6 164 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 CDCA3Q99618 268 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 FTHL17Q9BXU8 183 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 PADI3Q9ULW8 664 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 SORCS3Q9UPU3 1222 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
RABGGTA-217ENST00000560521 ZNF292O60281 2723 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 EP300Q09472 2414 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 MTCL1Q9Y4B5 1905 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 MED19A0JLT2 244 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 B4E1Z4 1266 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 C2CD4DB7Z1M9 353 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 STAM2O75886 525 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 FGF18O76093 207 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 SCG2P13521 617 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 PPFIA1Q13136 1202 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 ASTLQ6HA08 431 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 RASGRP4Q8TDF6 673 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 SENP7Q9BQF6 1050 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 TMX1Q9H3N1 280 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 MAD2L2Q9UI95 211 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
RABGGTA-217ENST00000560521 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms