RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 PRKAG2Q9UGJ0 569 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 MAFBQ9Y5Q3 323 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 ALPK3Q96L96 1907 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 DDX39AO00148 427 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 HBP1O60381 514 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 EVI5O60447 810 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 CAPN15O75808 1086 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 CCNE2O96020 404 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 F13A1P00488 732 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 PSMC5P62195 406 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 KAT2BQ92831 832 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 AK8Q96MA6 479 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 UNC45AQ9H3U1 944 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
RABGGTA-215ENST00000560207 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 CAND2O75155 1236 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 PARNO95453 639 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 BRD1O95696 1058 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 ZNF286BP0CG31 522 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 RTP1P59025 263 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 XKR3Q5GH77 459 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 UTP14CQ5TAP6 766 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 SWSAP1Q6NVH7 229 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 DPF3Q92784 378 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 ZSWIM4Q9H7M6 989 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 GTF2IRD1Q9UHL9 959 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 NOD1Q9Y239 953 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
RABGGTA-215ENST00000560207 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 C17orf102A2RUQ5 167 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 MAGEB2O15479 319 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 LYPLA2O95372 231 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 SPIRE1Q08AE8 756 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 TAF2Q6P1X5 1199 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 FAM126BQ8IXS8 530 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 CKAP2LQ8IYA6 745 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 IGSF22Q8N9C0 903 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 LRWD1Q9UFC0 647 aa13.53□□□□□ -0.24
RABGGTA-215ENST00000560207 TCHHQ07283 1943 aa13.52□□□□□ -0.24
RABGGTA-215ENST00000560207 CHMP2AO43633 222 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 SORBS3O60504 671 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 YEATS4O95619 227 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 CD4P01730 458 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 CLTBP09497 229 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 RPA1P27694 616 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 HOXC8P31273 242 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 TECP42680 631 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 CDC42EP1Q00587 391 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 TLE2Q04725 743 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 PTK7Q13308 1070 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 BFSP2Q13515 415 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 SLC39A14Q15043 492 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 PTGISQ16647 500 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 NCAPH2Q6IBW4 605 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 RSPH3Q86UC2 560 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 CCDC60Q8IWA6 550 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 HDAC6Q9UBN7 1215 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 EVPLQ92817 2033 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
RABGGTA-215ENST00000560207 GRIN2DO15399 1336 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PQBP1O60828 265 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PPP6R2O75170 966 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 OATP04181 439 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms