RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 WASF1Q92558 559 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 SLC5A5Q92911 643 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 RIT2Q99578 217 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 ZNF577Q9BSK1 485 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 MTIF3Q9H2K0 278 aaKnown RBP15□□□□□ -0.01
SMAD3-213ENST00000560175 KCNJ14Q9UNX9 436 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 PTPRSQ13332 1948 aa15□□□□□ -0.01
SMAD3-213ENST00000560175 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 RRN3P2A6NIE6 340 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 MSH4O15457 936 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 BAIAP3O94812 1187 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 MKRN4PQ13434 485 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-213ENST00000560175 PLCB4Q15147 1175 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 Q7L0L9 218 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 KRT25Q7Z3Z0 450 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 SMAP1Q8IYB5 467 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-213ENST00000560175 PHOSPHO2Q8TCD6 241 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 GLG1Q92896 1179 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 TNPO1Q92973 898 aaKnown RBP14.99□□□□□ -0.01
SMAD3-213ENST00000560175 TNFRSF25Q93038 417 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 TTYH1Q9H313 450 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-213ENST00000560175 SEMA6BQ9H3T3 888 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 GJB4Q9NTQ9 266 aa14.99□□□□□ -0.01
SMAD3-213ENST00000560175 MAFBQ9Y5Q3 323 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-213ENST00000560175 RSPH10B2B2RC85 870 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 PSMD10O75832 226 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 RSPH10BP0C881 870 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 ACTN1P12814 892 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 INSRRP14616 1297 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 ATP4AP20648 1035 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 KRT76Q01546 638 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 NONOQ15233 471 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■■□ 22.1
SMAD3-213ENST00000560175 GRIK4Q16099 956 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 PPP4R3AQ6IN85 833 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 TAF2Q6P1X5 1199 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 CNKSR3Q6P9H4 555 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 CCDC60Q8IWA6 550 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-213ENST00000560175 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-213ENST00000560175 LLPHQ9BRT6 129 aaKnown RBP14.98□□□□□ -0.01
SMAD3-213ENST00000560175 PBX4Q9BYU1 374 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 AZI2Q9H6S1 392 aa14.98□□□□□ -0.01
SMAD3-213ENST00000560175 EVPLQ92817 2033 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 MYO9BQ13459 2157 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 SIP14410 1827 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 GRXCR1A8MXD5 290 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 DTNBO60941 627 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 RPLP2P05387 115 aaKnown RBP14.97□□□□□ -0.01
SMAD3-213ENST00000560175 DNAJB2P25686 324 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 THPOP40225 353 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 TCTN1Q2MV58 587 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 PLEKHG4Q58EX7 1191 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 ETNPPLQ8TBG4 499 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 GUCD1Q96NT3 240 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 PCDHA10Q9Y5I2 948 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 SLC4A7Q9Y6M7 1214 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 MICAL3Q7RTP6 2002 aa14.97□□□□□ -0.01
SMAD3-213ENST00000560175 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 POTEB3A0JP26 581 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 ZBTB42B2RXF5 422 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 HBP1O60381 514 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 JAK2O60674 1132 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 TDP2O95551 362 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 MARK3P27448 753 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 PBX2P40425 430 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 MGAT3Q09327 533 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 INF2Q27J81 1249 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 EARS2Q5JPH6 523 aaKnown RBP14.96□□□□□ -0.01
SMAD3-213ENST00000560175 ZNF697Q5TEC3 545 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 FAM160B1Q5W0V3 765 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 SWSAP1Q6NVH7 229 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 POTEBQ6S5H4 581 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 RDM1Q8NG50 284 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 ATP8B4Q8TF62 1192 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 OSBPL7Q9BZF2 842 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 FTOQ9C0B1 505 aaKnown RBP eCLIP14.96□□□□□ -0.01
SMAD3-213ENST00000560175 KCNMB3Q9NPA1 279 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 ZNF302Q9NR11 478 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-213ENST00000560175 TUBE1Q9UJT0 475 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 PCDHA2Q9Y5H9 948 aa14.96□□□□□ -0.01
SMAD3-213ENST00000560175 COL1A2P08123 1366 aa14.96□□□□□ -0.02
SMAD3-213ENST00000560175 CHD7Q9P2D1 2997 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 DDX39AO00148 427 aaKnown RBP14.95□□□□□ -0.02
SMAD3-213ENST00000560175 EFCAB14O75071 495 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 CHRNA1P02708 482 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 MMP1P03956 469 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 GCFC2P16383 781 aaKnown RBP14.95□□□□□ -0.02
SMAD3-213ENST00000560175 SFNP31947 248 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 RABEP1Q15276 862 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 RAB30Q15771 203 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 BBXQ8WY36 941 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-213ENST00000560175 SLC9A7Q96T83 725 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 STXBP5LQ9Y2K9 1186 aa14.95□□□□□ -0.02
SMAD3-213ENST00000560175 PCDHA11Q9Y5I1 949 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms