RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 FAM160B1Q5W0V3 765 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 CCDC155Q8N6L0 562 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 ATP6V0A1Q93050 837 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 FAM20AQ96MK3 541 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 SETD4Q9NVD3 440 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 TBX3O15119 743 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 PSAPP07602 524 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 CSF2RAP15509 400 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 SFNP31947 248 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 PPIGQ13427 754 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 CUL4AQ13619 759 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 HIC1Q14526 733 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 SWSAP1Q6NVH7 229 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 TDHQ8IZJ6 230 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 AFAP1L1Q8TED9 768 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 GJA10Q969M2 543 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 KCNMB3Q9NPA1 279 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 ZNF302Q9NR11 478 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 MARCH6O60337 910 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 CCL23P55773 120 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 CCDC60Q8IWA6 550 aaPredicted RBP15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 DISC1Q9NRI5 854 aa15.44■□□□□ 0.06
CHRNB4-204ENST00000559849 TREHO43280 583 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 JAK3P52333 1124 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 ADAM17P78536 824 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 PDXDC2PQ6P474 469 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 SERINC5Q86VE9 423 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 NOSTRINQ8IVI9 506 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 LMBR1Q8WVP7 490 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 WNT8AQ9H1J5 351 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 MAFBQ9Y5Q3 323 aaPredicted RBP15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 LAMA2P24043 3122 aaKnown RBP15.43■□□□□ 0.06
CHRNB4-204ENST00000559849 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 RRN3P2A6NIE6 340 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 RBL2Q08999 1139 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 PPFIA1Q13136 1202 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 PLCB4Q15147 1175 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 B3GNT9Q6UX72 402 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 RPUSD2Q8IZ73 545 aaKnown RBP15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 RDM1Q8NG50 284 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 UNC45AQ9H3U1 944 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 WDR81Q562E7 1941 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 CHMP2AO43633 222 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 IQCF3P0C7M6 154 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 INSRRP14616 1297 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 DHX38Q92620 1227 aaKnown RBP15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 HAS1Q92839 578 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 SNX21Q969T3 373 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 SCLYQ96I15 445 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 GABBR1Q9UBS5 961 aa15.42■□□□□ 0.06
CHRNB4-204ENST00000559849 H3BQV1 296 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 K7ELQ4 463 aaPredicted RBP15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 CKBP12277 381 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 EPHB4P54760 987 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 GRIK4Q16099 956 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 MIER3Q7Z3K6 550 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 ATP8B4Q8TF62 1192 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 IL23AQ9NPF7 189 aa15.41■□□□□ 0.06
CHRNB4-204ENST00000559849 HBP1O60381 514 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 SELPP16109 830 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 RFC2P35250 354 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 TRAPPC10P48553 1259 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 PPP2R5CQ13362 524 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 SHHQ15465 462 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 C16orf59Q7L2K0 433 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 CKAP2LQ8IYA6 745 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 INTS4Q96HW7 963 aaKnown RBP15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 TUBE1Q9UJT0 475 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 KIF28PB7ZC32 967 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 NEMFO60524 1076 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 ATP4AP20648 1035 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 CALCRLQ16602 461 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 TRIM71Q2Q1W2 868 aaKnown RBP15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 LRRC8DQ7L1W4 858 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 BBXQ8WY36 941 aaPredicted RBP15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 WNT8BQ93098 351 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 NOL7Q9UMY1 257 aaKnown RBP15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 PCDHA12Q9UN75 941 aa15.4■□□□□ 0.06
CHRNB4-204ENST00000559849 MBLAC1A4D2B0 266 aaPredicted RBP15.39■□□□□ 0.05
CHRNB4-204ENST00000559849 PFKMP08237 780 aa15.39■□□□□ 0.05
CHRNB4-204ENST00000559849 MCM7P33993 719 aa15.39■□□□□ 0.05
CHRNB4-204ENST00000559849 THPOP40225 353 aa15.39■□□□□ 0.05
CHRNB4-204ENST00000559849 IGBP1P78318 339 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms