RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 EVPLQ92817 2033 aa12.45□□□□□ -0.42
SPG11-216ENST00000559347 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
SPG11-216ENST00000559347 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
SPG11-216ENST00000559347 DHX15O43143 795 aaKnown RBP12.44□□□□□ -0.42
SPG11-216ENST00000559347 EDIL3O43854 480 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 CAND2O75155 1236 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 BAIAP3O94812 1187 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 ATG7O95352 703 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 CTDNEP1O95476 244 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 CCNE2O96020 404 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 GNAT1P11488 350 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 THPOP40225 353 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 NEK4P51957 841 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 PPFIA1Q13136 1202 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 RAB30Q15771 203 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 ZNF577Q9BSK1 485 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPG11-216ENST00000559347 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 STXBP5LQ9Y2K9 1186 aa12.44□□□□□ -0.42
SPG11-216ENST00000559347 IGKV6D-21A0A0A0MT36 114 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 DTNBO60941 627 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 CTSHP09668 335 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
SPG11-216ENST00000559347 GRIK4Q16099 956 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 PRR16Q569H4 304 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 CCDC60Q8IWA6 550 aaPredicted RBP12.43□□□□□ -0.42
SPG11-216ENST00000559347 TBCKQ8TEA7 893 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 PHF20Q9BVI0 1012 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
SPG11-216ENST00000559347 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
SPG11-216ENST00000559347 RALGAPA2Q2PPJ7 1873 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 COL4A6Q14031 1691 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
SPG11-216ENST00000559347 RSPH10B2B2RC85 870 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 RSPH10BP0C881 870 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
SPG11-216ENST00000559347 ST3GAL1Q11201 340 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 MARCH8Q5T0T0 291 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 ABHD15Q6UXT9 468 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 NECAB1Q8N987 351 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 UIMC1Q96RL1 719 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 CDX2Q99626 313 aaPredicted RBP12.42□□□□□ -0.42
SPG11-216ENST00000559347 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 TBC1D22BQ9NU19 505 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 MSRAQ9UJ68 235 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 KCNJ14Q9UNX9 436 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
SPG11-216ENST00000559347 IGSF9BQ9UPX0 1349 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 MSH4O15457 936 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 TDP2O95551 362 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
SPG11-216ENST00000559347 INSRRP14616 1297 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 XBP1P17861 261 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 KCNJ6P48051 423 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 SLC26A2P50443 739 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 STAT5BP51692 787 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 USP11P51784 963 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 RABGGTBP53611 331 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 IGBP1P78318 339 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 DEFB103AP81534 67 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 KRT76Q01546 638 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 NONOQ15233 471 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPG11-216ENST00000559347 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
SPG11-216ENST00000559347 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 MOXD1Q6UVY6 613 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 KRT25Q7Z3Z0 450 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 SMAP1Q8IYB5 467 aaPredicted RBP12.41□□□□□ -0.42
SPG11-216ENST00000559347 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
SPG11-216ENST00000559347 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 KIF2CQ99661 725 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
SPG11-216ENST00000559347 KIAA1671Q9BY89 1806 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 A0A0C4DFX4 3053 aa12.41□□□□□ -0.42
SPG11-216ENST00000559347 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 RRN3P2A6NIE6 340 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 BACH1O14867 736 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 MGAT3Q09327 533 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 GRIN2CQ14957 1233 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 INF2Q27J81 1249 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 Q4G0T1 1027 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 PLEKHG4Q58EX7 1191 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 FAM26DQ5JW98 314 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms