RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZNF365Q70YC5 407 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 LRRC8DQ7L1W4 858 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 PLPPR4Q7Z2D5 763 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 NEK8Q86SG6 692 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 SERINC5Q86VE9 423 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 TRIM50Q86XT4 487 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 DEFB123Q8N688 67 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 NECAB1Q8N987 351 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 FAM184AQ8NB25 1140 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 RASGRP4Q8TDF6 673 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 PPP1R13LQ8WUF5 828 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 CRYGNQ8WXF5 182 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 HERVK_113Q902F9 699 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 LRCH3Q96II8 777 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 RIT2Q99578 217 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 LLPHQ9BRT6 129 aaKnown RBP4.95□□□□□ -1.62
SNX1-205ENST00000559339 PHF20Q9BVI0 1012 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 WNT8AQ9H1J5 351 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 BCAS3Q9H6U6 928 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 ZNF302Q9NR11 478 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 SETD4Q9NVD3 440 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 PCDH10Q9P2E7 1040 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 DDX25Q9UHL0 483 aaKnown RBP4.95□□□□□ -1.62
SNX1-205ENST00000559339 MSRAQ9UJ68 235 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 TUBE1Q9UJT0 475 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 CEP131Q9UPN4 1083 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 PCDHA10Q9Y5I2 948 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 SLC4A7Q9Y6M7 1214 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 UMODL1Q5DID0 1318 aa4.95□□□□□ -1.62
SNX1-205ENST00000559339 LRRC37A2A6NM11 1700 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 SZT2Q5T011 3432 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 TMEM265A0A087WTH1 108 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 ABHD14A-ACY1A0A1B0GW23 586 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 GSTTP1A0A1W2PQM5 241 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 POTEB3A0JP26 581 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 M0R2N6 131 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 SOX1O00570 391 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 MSH4O15457 936 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 TREHO43280 583 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 HBP1O60381 514 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 LGR5O75473 907 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 ATG7O95352 703 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 BAG4O95429 457 aaKnown RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 CTDNEP1O95476 244 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 INSRRP14616 1297 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 ATP2A2P16615 1042 aaKnown RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 DNAJB2P25686 324 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 TMOD1P28289 359 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 HOXC8P31273 242 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 JAK3P52333 1124 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 EPHB4P54760 987 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 IGBP1P78318 339 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 ZNF200P98182 395 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 ITGB3BPQ13352 177 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 IKBKEQ14164 716 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 RAB30Q15771 203 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 GRIK4Q16099 956 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 INF2Q27J81 1249 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 ZNF618Q5T7W0 954 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 LRCH2Q5VUJ6 765 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 FAM109BQ6ICB4 259 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 SWSAP1Q6NVH7 229 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 POTEBQ6S5H4 581 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 PIK3AP1Q6ZUJ8 805 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 C16orf59Q7L2K0 433 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 RPAINQ86UA6 219 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 SLFN12Q8IYM2 578 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 NME8Q8N427 588 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 NSUN7Q8NE18 718 aaKnown RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 PHOSPHO2Q8TCD6 241 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 LMBR1Q8WVP7 490 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 BBXQ8WY36 941 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 TIFAQ96CG3 184 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 C8orf76Q96K31 380 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 FAM167AQ96KS9 214 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 AIFM3Q96NN9 605 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 SLC9A7Q96T83 725 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 TEKT3Q9BXF9 490 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 TSPYL2Q9H2G4 693 aaPredicted RBP4.94□□□□□ -1.62
SNX1-205ENST00000559339 SLC28A3Q9HAS3 691 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 DISC1Q9NRI5 854 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 KCNJ14Q9UNX9 436 aa4.94□□□□□ -1.62
SNX1-205ENST00000559339 LCTP09848 1927 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CYP3A7-CYP3A51PA0A087WV96 503 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 IGKV6D-21A0A0A0MT36 114 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 MBLAC1A4D2B0 266 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 TBX3O15119 743 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 MAGEB2O15479 319 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 DHX15O43143 795 aaKnown RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 CHMP2AO43633 222 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 JAK2O60674 1132 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 DKC1O60832 514 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNX1-205ENST00000559339 LARGE1O95461 756 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 TDP2O95551 362 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CCNE2O96020 404 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CXCL10P02778 98 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 MMP1P03956 469 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 AMHP03971 560 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CTSHP09668 335 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 FDPSP14324 419 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms