RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SMAD3P84022 425 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 PURAQ00577 322 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 NFIAQ12857 509 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 DUSP4Q13115 394 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 IKZF1Q13422 519 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ODF1Q14990 250 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 SMAD2Q15796 467 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 INAVAQ3KP66 663 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 UAP1L1Q3KQV9 507 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 FIGNQ5HY92 759 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ANGEL2Q5VTE6 544 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 RNF43Q68DV7 783 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 HHIPL2Q6UWX4 724 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 CEP128Q6ZU80 1094 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 OTOP1Q7RTM1 612 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 OTOP3Q7RTS5 596 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 NLRP10Q86W26 655 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ZZZ3Q8IYH5 903 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 CAMKK1Q8N5S9 505 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 SAMD3Q8N6K7 520 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ZNF610Q8N9Z0 462 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 SHKBP1Q8TBC3 707 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 NETO1Q8TDF5 533 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 RTF1Q92541 710 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 DPF3Q92784 378 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 FERMT2Q96AC1 680 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 TTC17Q96AE7 1141 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 TEKT5Q96M29 485 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 DBNDD2Q9BQY9 259 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ANO3Q9BYT9 981 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ZDHHC5Q9C0B5 715 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 QRSL1Q9H0R6 528 aaKnown RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 MKNK2Q9HBH9 465 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 TCF7L1Q9HCS4 588 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 NMRK2Q9NPI5 230 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ACSS2Q9NR19 701 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 MAN1C1Q9NR34 630 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 CCM2LQ9NUG4 571 aaPredicted RBP2.92□□□□□ -1.94
GABPB1-209ENST00000559100 RIC8BQ9NVN3 520 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 EDARQ9UNE0 448 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 TAF6LQ9Y6J9 622 aa2.92□□□□□ -1.94
GABPB1-209ENST00000559100 ST20-MTHFSA0A0A6YYL1 179 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 SLC27A2O14975 620 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CTNND1O60716 968 aaKnown RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 USP2O75604 605 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 FOSP01100 380 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 NTRK1P04629 796 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CLEC2LP0C7M8 214 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 MYBP10242 640 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TRIM27P14373 513 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 RTP1P59025 263 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 HTRA3P83110 453 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 SRSF2Q01130 221 aaKnown RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 KIF23Q02241 960 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TEKQ02763 1124 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 GRM3Q14832 879 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ZRSR2Q15696 482 aaKnown RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CHRNA2Q15822 529 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 UGT8Q16880 541 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TOR2AQ5JU69 321 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TMEM240Q5SV17 173 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 C10orf62Q5T681 223 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 MROH9Q5TGP6 573 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 BTBD8Q5XKL5 378 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 STEAP3Q658P3 488 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CREB3L3Q68CJ9 461 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 FSTL4Q6MZW2 842 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TIGD7Q6NT04 549 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CCDC62Q6P9F0 684 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 PRR23CQ6ZRP0 262 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 KCTD1Q719H9 257 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 EPM2AIP1Q7L775 607 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 RBM12BQ8IXT5 1001 aaKnown RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 GRAMD1CQ8IYS0 662 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CMTR2Q8IYT2 770 aaKnown RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 PPM1NQ8N819 430 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 C7orf31Q8N865 590 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 LMBR1Q8WVP7 490 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ASB11Q8WXH4 323 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 MAP6Q96JE9 813 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 HHIPL1Q96JK4 782 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 HRASLS5Q96KN8 279 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 AIFM3Q96NN9 605 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ACAP3Q96P50 834 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 NUP88Q99567 741 aaPredicted RBP2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ARPC5LQ9BPX5 153 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 SARGQ9BW04 601 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CDIP1Q9H305 208 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 SLC6A20Q9NP91 592 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ANLNQ9NQW6 1124 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 CHST12Q9NRB3 414 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 KCNH7Q9NS40 1196 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.91□□□□□ -1.945e-6■■■■□ 19.7
GABPB1-209ENST00000559100 SLAMF8Q9P0V8 285 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 TNFRSF10DQ9UBN6 386 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 ADGRE2Q9UHX3 823 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 INTUQ9ULD6 942 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 SRPK3Q9UPE1 567 aa2.91□□□□□ -1.94
GABPB1-209ENST00000559100 PLAGL2Q9UPG8 496 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms