RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
LYSMD2-203ENST00000558126 DSCC1Q9BVC3 393 aa12.04□□□□□ -0.48
LYSMD2-203ENST00000558126 KRT23Q9C075 422 aa12.04□□□□□ -0.48
LYSMD2-203ENST00000558126 RNPEPQ9H4A4 650 aa12.04□□□□□ -0.48
LYSMD2-203ENST00000558126 MLXIPQ9HAP2 919 aa12.04□□□□□ -0.48
LYSMD2-203ENST00000558126 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 LGALS2P05162 132 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 SMIM10L2AP0DMW4 78 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 SMIM10L2BP0DMW5 78 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 CCND2P30279 289 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 NEDD9Q14511 834 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 CLP1Q92989 425 aaKnown RBP12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 IL17RAQ96F46 866 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 OSBPL3Q9H4L5 887 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 VAT1LQ9HCJ6 419 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
LYSMD2-203ENST00000558126 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 KLRF2D3W0D1 207 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 H3BQ06 376 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 GCOM1H8Y6P7 765 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 HIP1O00291 1037 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 TREHO43280 583 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 POLR2MP0CAP2 368 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 BMPR1AP36894 532 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 LTBRP36941 435 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 NHLH1Q02575 133 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 AAMPQ13685 434 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 IMMTQ16891 758 aaKnown RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 HERC4Q5GLZ8 1057 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 METTL3Q86U44 580 aaKnown RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 PLVAPQ9BX97 442 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 RIOX1Q9H6W3 641 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 FRMPD4Q14CM0 1322 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 SIP14410 1827 aa12.02□□□□□ -0.49
LYSMD2-203ENST00000558126 MICAL3Q7RTP6 2002 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 B4E1Z4 1266 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 NOP56O00567 594 aaKnown RBP12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 PPP1R11O60927 126 aaPredicted RBP12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 FECHP22830 423 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 MRE11P49959 708 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 COPS2P61201 443 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 SEC23AQ15436 765 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 PKN1Q16512 942 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 TAF2Q6P1X5 1199 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 BMP8AQ7Z5Y6 402 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 FIBCD1Q8N539 461 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 UBAC1Q9BSL1 405 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 C11orf84Q9BUA3 381 aaPredicted RBP12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 EHMT1Q9H9B1 1298 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 RC3H2Q9HBD1 1191 aaKnown RBP12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 MAD2L2Q9UI95 211 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 NRCAMQ92823 1304 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
LYSMD2-203ENST00000558126 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
LYSMD2-203ENST00000558126 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 NAALADL2Q58DX5 795 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 GPIHBP1Q8IV16 184 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 IL31RAQ8NI17 732 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 RILPL2Q969X0 211 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 ZNF689Q96CS4 500 aaPredicted RBP12□□□□□ -0.49
LYSMD2-203ENST00000558126 UIMC1Q96RL1 719 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 GPR20Q99678 358 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 CLDND1Q9NY35 253 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 ZNF215Q9UL58 517 aaPredicted RBP12□□□□□ -0.49
LYSMD2-203ENST00000558126 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
LYSMD2-203ENST00000558126 MYO7AQ13402 2215 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 FIBPO43427 364 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 MBTPS2O43462 519 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 ACTN4O43707 911 aaKnown RBP11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 GFRA3O60609 400 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 UPP2O95045 317 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 EYA4O95677 639 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 HOXA13P31271 388 aaPredicted RBP11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 IRS1P35568 1242 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 MRPS9P82933 396 aaKnown RBP11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 HYAL1Q12794 435 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
LYSMD2-203ENST00000558126 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms