RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 EXOC8Q8IYI6 725 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 ZNF710Q8N1W2 664 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-234ENST00000557703 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-234ENST00000557703 NRBP2Q9NSY0 501 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
SHMT2-234ENST00000557703 COL1A2P08123 1366 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 KIAA0355O15063 1070 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 CAND2O75155 1236 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 ZNF286BP0CG31 522 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHMT2-234ENST00000557703 UTP14CQ5TAP6 766 aaKnown RBP15.4■□□□□ 0.06
SHMT2-234ENST00000557703 SWSAP1Q6NVH7 229 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 PDXDC2PQ6P474 469 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 UNC45AQ9H3U1 944 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 VAV3Q9UKW4 847 aa15.4■□□□□ 0.06
SHMT2-234ENST00000557703 POTEB3A0JP26 581 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 C17orf102A2RUQ5 167 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 DDX39AO00148 427 aaKnown RBP15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 SLC26A4O43511 780 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PQBP1O60828 265 aaKnown RBP15.39■□□□□ 0.05
SHMT2-234ENST00000557703 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHMT2-234ENST00000557703 ATP2B1P20020 1258 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PSMC5P62195 406 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PSMC6P62333 389 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 RBL2Q08999 1139 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 SPIRE1Q08AE8 756 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PTGDRQ13258 359 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PTK7Q13308 1070 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 BFSP2Q13515 415 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 ZNF174Q15697 407 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 FAM47CQ5HY64 1035 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 ZNF484Q5JVG2 852 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 TAF2Q6P1X5 1199 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 POTEBQ6S5H4 581 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 RPAINQ86UA6 219 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 CCDC60Q8IWA6 550 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-234ENST00000557703 C4orf32Q8N8J7 132 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PCYT2Q99447 389 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 TMEM39AQ9NV64 488 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 HDAC6Q9UBN7 1215 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 NOD1Q9Y239 953 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 ATP6V1DQ9Y5K8 247 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 DOCK5Q9H7D0 1870 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
SHMT2-234ENST00000557703 SORBS3O60504 671 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 LYPLA2O95372 231 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-234ENST00000557703 TXKP42681 527 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 QARSP47897 775 aaKnown RBP15.38■□□□□ 0.05
SHMT2-234ENST00000557703 ADAM17P78536 824 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 ATP2C1P98194 919 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-234ENST00000557703 RESTQ13127 1097 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 PTGISQ16647 500 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 XKR3Q5GH77 459 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 HAUS3Q68CZ6 603 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 DTHD1Q6ZMT9 781 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 C4orf19Q8IY42 314 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 AK8Q96MA6 479 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 RNPEPQ9H4A4 650 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 GABBR1Q9UBS5 961 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-234ENST00000557703 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
SHMT2-234ENST00000557703 MBLAC1A4D2B0 266 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-234ENST00000557703 MAGEB2O15479 319 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 B4GALT4O60513 344 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 PPFIA1Q13136 1202 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 PLCB4Q15147 1175 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 OTUD6AQ7L8S5 288 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 RSPH3Q86UC2 560 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 SERINC5Q86VE9 423 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 CKAP2LQ8IYA6 745 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 NME8Q8N427 588 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 IGSF22Q8N9C0 903 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 ZNF396Q96N95 335 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-234ENST00000557703 HSD17B14Q9BPX1 270 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-234ENST00000557703 TMEM60Q9H2L4 133 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 PDLIM7Q9NR12 457 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 TRPC6Q9Y210 931 aa15.37■□□□□ 0.05
SHMT2-234ENST00000557703 WNT7AO00755 349 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 TIMP1P01033 207 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 NUCB2P80303 420 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 CDC42EP1Q00587 391 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 TRIM50Q86XT4 487 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 C7orf61Q8IZ16 206 aa15.36■□□□□ 0.05
SHMT2-234ENST00000557703 LBHD1Q9BQE6 289 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms