RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ZNF274Q96GC6 653 aaPredicted RBP19.02■□□□□ 0.64
NEK9-211ENST00000557673 IFIH1Q9BYX4 1025 aaKnown RBP19.02■□□□□ 0.64
NEK9-211ENST00000557673 CD320Q9NPF0 282 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 TPCN1Q9ULQ1 816 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 FRMPD4Q14CM0 1322 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 CCDC196A0A1B0GTZ2 297 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 GRXCR2A6NFK2 248 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 PRR33A8MZF0 331 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 NCK2O43639 380 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 UPP2O95045 317 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 CTSHP09668 335 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 XRRA1Q6P2D8 792 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 TMEM192Q8IY95 271 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 GIMAP8Q8ND71 665 aaPredicted RBP19.01■□□□□ 0.63
NEK9-211ENST00000557673 SMARCC2Q8TAQ2 1214 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 NEK9Q8TD19 979 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 GPKOWQ92917 476 aaPredicted RBP eCLIP19.01■□□□□ 0.63
NEK9-211ENST00000557673 GPR20Q99678 358 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 NCOA5Q9HCD5 579 aaKnown RBP19.01■□□□□ 0.63
NEK9-211ENST00000557673 SETD4Q9NVD3 440 aa19.01■□□□□ 0.63
NEK9-211ENST00000557673 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
NEK9-211ENST00000557673 FAM86C2PA6NEL3 165 aa19■□□□□ 0.63
NEK9-211ENST00000557673 MEIS2O14770 477 aa19■□□□□ 0.63
NEK9-211ENST00000557673 ADD1P35611 737 aaKnown RBP19■□□□□ 0.63
NEK9-211ENST00000557673 CUL5Q93034 780 aa19■□□□□ 0.63
NEK9-211ENST00000557673 PABPC5Q96DU9 382 aaKnown RBP19■□□□□ 0.63
NEK9-211ENST00000557673 NSUN3Q9H649 340 aaKnown RBP19■□□□□ 0.63
NEK9-211ENST00000557673 RWDD3Q9Y3V2 267 aa19■□□□□ 0.63
NEK9-211ENST00000557673 NRCAMQ92823 1304 aa19■□□□□ 0.63
NEK9-211ENST00000557673 PIK3CDO00329 1044 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 LARGE1O95461 756 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 CCT2P78371 535 aaKnown RBP18.99■□□□□ 0.63
NEK9-211ENST00000557673 MRPS9P82933 396 aaKnown RBP18.99■□□□□ 0.63
NEK9-211ENST00000557673 ARHGAP4P98171 946 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 FAM26DQ5JW98 314 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 HEATR3Q7Z4Q2 680 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 NLRX1Q86UT6 975 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 FIBCD1Q8N539 461 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 RTEL1Q9NZ71 1219 aa18.99■□□□□ 0.63
NEK9-211ENST00000557673 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.98■□□□□ 0.63
NEK9-211ENST00000557673 PFKFB2O60825 505 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 RB1P06400 928 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 IL9P15248 144 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 STK3Q13188 491 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 NTRK3Q16288 839 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 UBE2SQ16763 222 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 TCEAL5Q5H9L2 206 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 TAF2Q6P1X5 1199 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 EP400NLQ6ZTU2 488 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 RSPH3Q86UC2 560 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 BCAS3Q9H6U6 928 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 PSTPIP2Q9H939 334 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 PRKAG3Q9UGI9 489 aa18.98■□□□□ 0.63
NEK9-211ENST00000557673 H3BQ06 376 aaPredicted RBP18.97■□□□□ 0.63
NEK9-211ENST00000557673 ADAM17P78536 824 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 SCRN1Q12765 414 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 COL19A1Q14993 1142 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 ME3Q16798 604 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 UTP14CQ5TAP6 766 aaKnown RBP18.97■□□□□ 0.63
NEK9-211ENST00000557673 WWC2Q6AWC2 1192 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 RPAINQ86UA6 219 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 LMBR1Q8WVP7 490 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 CDHR1Q96JP9 859 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 C11orf84Q9BUA3 381 aaPredicted RBP18.97■□□□□ 0.63
NEK9-211ENST00000557673 LMAN2LQ9H0V9 348 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
NEK9-211ENST00000557673 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 DOCK5Q9H7D0 1870 aa18.97■□□□□ 0.63
NEK9-211ENST00000557673 ST18O60284 1047 aa18.96■□□□□ 0.63
NEK9-211ENST00000557673 IFNAR1P17181 557 aa18.96■□□□□ 0.63
NEK9-211ENST00000557673 SEMA3FQ13275 785 aa18.96■□□□□ 0.63
NEK9-211ENST00000557673 TRIM50Q86XT4 487 aa18.96■□□□□ 0.63
NEK9-211ENST00000557673 GTF3C6Q969F1 213 aa18.96■□□□□ 0.63
NEK9-211ENST00000557673 C5orf67F2Z3F1 127 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 DCXO43602 365 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 RPLP2P05387 115 aaKnown RBP18.95■□□□□ 0.62
NEK9-211ENST00000557673 CTNNB1P35222 781 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 BMPR1AP36894 532 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 SP4Q02446 784 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 ST3GAL1Q11201 340 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 TYW1BQ6NUM6 668 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 PHKBQ93100 1093 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 UIMC1Q96RL1 719 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 RNF26Q9BY78 433 aaPredicted RBP18.95■□□□□ 0.62
NEK9-211ENST00000557673 CLDND1Q9NY35 253 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 V9GY48 417 aaPredicted RBP18.95■□□□□ 0.62
NEK9-211ENST00000557673 PIEZO1Q92508 2521 aa18.95■□□□□ 0.62
NEK9-211ENST00000557673 RBAK-RBAKDNI3L0D1 243 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 CPLX1O14810 134 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
NEK9-211ENST00000557673 CHRNA1P02708 482 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 NAPAP54920 295 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 GPRASP2Q96D09 838 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 OSBPL7Q9BZF2 842 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms