RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 C11orf49Q9H6J7 331 aa15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 STARD7Q9NQZ5 370 aa15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 SRPRBQ9Y5M8 271 aaKnown RBP15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 MAFBQ9Y5Q3 323 aaPredicted RBP15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
SUPT16H-208ENST00000557652 BACH1O14867 736 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 LYPLA2O95372 231 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 RPLP2P05387 115 aaKnown RBP15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 PSMC5P62195 406 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 SP4Q02446 784 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 SNX17Q15036 470 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 CXCL17Q6UXB2 119 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 SLC43A3Q8NBI5 491 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 BCAS3Q9H6U6 928 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 RCOR1Q9UKL0 485 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 CLIC4Q9Y696 253 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 COL1A2P08123 1366 aa15.85■□□□□ 0.13
SUPT16H-208ENST00000557652 EVPLQ92817 2033 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 SPTLC2O15270 562 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 GNAT1P11488 350 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 XRCC6P12956 609 aaKnown RBP eCLIP15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 RPA1P27694 616 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 TECP42680 631 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 PSEN2P49810 448 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 KRT79Q5XKE5 535 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 NCAPH2Q6IBW4 605 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 PDXDC2PQ6P474 469 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 FAM173BQ6P4H8 233 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 C4orf19Q8IY42 314 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 EXOC8Q8IYI6 725 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 KRI1Q8N9T8 703 aaKnown RBP15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 KAT2BQ92831 832 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 TOX2Q96NM4 488 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 HSD17B14Q9BPX1 270 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 KDM3AQ9Y4C1 1321 aa15.84■□□□□ 0.13
SUPT16H-208ENST00000557652 ARID2Q68CP9 1835 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 RRN3P2A6NIE6 340 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 CHMP2AO43633 222 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 HBP1O60381 514 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 EN2P19622 333 aaPredicted RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 DNM1Q05193 864 aaKnown RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 ITGA7Q13683 1181 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 MFSD10Q14728 455 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 XKR3Q5GH77 459 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 FOXD4L5Q5VV16 416 aaPredicted RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 SWSAP1Q6NVH7 229 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 CCDC60Q8IWA6 550 aaPredicted RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 ATP8B4Q8TF62 1192 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 FOXD4L4Q8WXT5 416 aaPredicted RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 PAWRQ96IZ0 340 aaKnown RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 PCYT2Q99447 389 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 EIF2AK1Q9BQI3 630 aaKnown RBP15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 GABBR1Q9UBS5 961 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 NRCAMQ92823 1304 aa15.83■□□□□ 0.12
SUPT16H-208ENST00000557652 VWA3AA6NCI4 1184 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 POTEMA6NI47 508 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 ARVCFO00192 962 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 EML1O00423 815 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 CUTAO60888 179 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 ZNF286BP0CG31 522 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 TXLNAP40222 546 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 UTP14CQ5TAP6 766 aaKnown RBP15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 OTUD6AQ7L8S5 288 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 GJA10Q969M2 543 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 VTI1AQ96AJ9 217 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 SPATA32Q96LK8 384 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 CCSER1Q9C0I3 900 aa15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 SENP6Q9GZR1 1112 aaPredicted RBP15.82■□□□□ 0.12
SUPT16H-208ENST00000557652 POTEB3A0JP26 581 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 TLR3O15455 904 aaKnown RBP15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 SORBS3O60504 671 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 PTGS1P23219 599 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 HOXC8P31273 242 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 UBA7P41226 1012 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 CDK7P50613 346 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 ZNF484Q5JVG2 852 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 HYIQ5T013 277 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 POTEBQ6S5H4 581 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 SLC39A5Q6ZMH5 540 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 ANKRD33Q7Z3H0 272 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 ALPK3Q96L96 1907 aa15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 JPH2Q9BR39 696 aaPredicted RBP15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 PYM1Q9BRP8 204 aaKnown RBP15.81■□□□□ 0.12
SUPT16H-208ENST00000557652 LXNQ9BS40 222 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms