RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 SMCR8Q8TEV9 937 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 REEP2Q9BRK0 252 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 TXNRD2Q9NNW7 524 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 LIMA1Q9UHB6 759 aaKnown RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 COL4A3BPQ9Y5P4 624 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.192e-9■■□□□ 13.3
SHMT2-233ENST00000557529 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 NPHP3-ACAD11A0A0J9YXS1 232 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 LRRC10BA6NIK2 292 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 KCNJ18B7U540 433 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 BTBD19C9JJ37 291 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 PEX10O60683 326 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 DKC1O60832 514 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHMT2-233ENST00000557529 RGS20O76081 388 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 KCNA2P16389 499 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
SHMT2-233ENST00000557529 PSMC5P62195 406 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 LRRC63Q05C16 580 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 KCNJ12Q14500 433 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
SHMT2-233ENST00000557529 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 VSTM4Q8IW00 320 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 CSGALNACT2Q8N6G5 542 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 PIGOQ8TEQ8 1089 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-233ENST00000557529 MMP19Q99542 508 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 TSG101Q99816 390 aa13.85□□□□□ -0.19
SHMT2-233ENST00000557529 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-233ENST00000557529 TRIM49BA6NDI0 452 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 SOWAHBA6NEL2 793 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 ITGBL1O95965 494 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 CCNE2O96020 404 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 GUCY2CP25092 1073 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 PMS1P54277 932 aaKnown RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 NR1I3Q14994 352 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 Q3C1V9 767 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 ANKRD40Q6AI12 368 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 C1orf186Q6ZWK4 172 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 APTXQ7Z2E3 356 aaKnown RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 FILIP1Q7Z7B0 1213 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 C4orf19Q8IY42 314 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 DUSP9Q99956 384 aaKnown RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 RUSC1Q9BVN2 902 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 SRRTQ9BXP5 876 aaKnown RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 JPH1Q9HDC5 661 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 WRAP73Q9P2S5 460 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-233ENST00000557529 NRBP1Q9UHY1 535 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 PCDHA2Q9Y5H9 948 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 ASTN1O14525 1302 aa13.84□□□□□ -0.19
SHMT2-233ENST00000557529 COBLO75128 1261 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 FAM13AO94988 1023 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 PSAPP07602 524 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 CYP2C8P10632 490 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.19
SHMT2-233ENST00000557529 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 KRT31Q15323 416 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.19
SHMT2-233ENST00000557529 TIPINQ9BVW5 301 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 SEMA6BQ9H3T3 888 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 OLFML3Q9NRN5 406 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 ANKEF1Q9NU02 776 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 SEL1LQ9UBV2 794 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 SLC9A2Q9UBY0 812 aa13.83□□□□□ -0.19
SHMT2-233ENST00000557529 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 NRDCO43847 1150 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 TPM2P07951 284 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 TGFB3P10600 412 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
SHMT2-233ENST00000557529 HUNKP57058 714 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
SHMT2-233ENST00000557529 LRRC41Q15345 812 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 CST9Q5W186 159 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 SPECC1LQ69YQ0 1117 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 SFR1Q86XK3 245 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF830Q96NB3 372 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-233ENST00000557529 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
SHMT2-233ENST00000557529 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
SHMT2-233ENST00000557529 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
SHMT2-233ENST00000557529 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms