RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 KIAA1841Q6NSI8 718 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 C12orf76Q8N812 135 aaPredicted RBP11.1□□□□□ -0.63
NEDD1-211ENST00000557454 NETO1Q8TDF5 533 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 RNPEPQ9H4A4 650 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 ENTPD7Q9NQZ7 604 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 TMEM260Q9NX78 707 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.1□□□□□ -0.63
NEDD1-211ENST00000557454 NAV2Q8IVL1 2488 aa11.1□□□□□ -0.63
NEDD1-211ENST00000557454 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 IBSPP21815 317 aaPredicted RBP11.09□□□□□ -0.63
NEDD1-211ENST00000557454 RARSP54136 660 aaKnown RBP11.09□□□□□ -0.63
NEDD1-211ENST00000557454 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 KANK3Q6NY19 840 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 KCNK12Q9HB15 430 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 AAASQ9NRG9 546 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 SETD4Q9NVD3 440 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 NOP58Q9Y2X3 529 aaKnown RBP11.09□□□□□ -0.63
NEDD1-211ENST00000557454 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
NEDD1-211ENST00000557454 BPTFQ12830 3046 aa11.09□□□□□ -0.63
NEDD1-211ENST00000557454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-211ENST00000557454 C1QTNF9BB2RNN3 333 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 PPFIA4O75335 1185 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 C1QTNF9P0C862 333 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 GLULP15104 373 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEDD1-211ENST00000557454 STXBP2Q15833 593 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 PUS7LQ9H0K6 701 aaKnown RBP11.08□□□□□ -0.64
NEDD1-211ENST00000557454 EPC1Q9H2F5 836 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 WNT16Q9UBV4 365 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 SIT1Q9Y3P8 196 aa11.08□□□□□ -0.64
NEDD1-211ENST00000557454 HELZ2Q9BYK8 2649 aaKnown RBP11.07□□□□□ -0.64
NEDD1-211ENST00000557454 H3BRB1 525 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 LRRN2O75325 713 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 STAG3L1P0CL83 205 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 MGAT3Q09327 533 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 FBXO47Q5MNV8 452 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 ATAT1Q5SQI0 421 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 N4BP2L1Q5TBK1 243 aaPredicted RBP11.07□□□□□ -0.64
NEDD1-211ENST00000557454 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 UNQ6494/PRO21346Q6UXR6 183 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
NEDD1-211ENST00000557454 COLGALT1Q8NBJ5 622 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
NEDD1-211ENST00000557454 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
NEDD1-211ENST00000557454 ZNF287Q9HBT7 754 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 GMEB2Q9UKD1 530 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 STX8Q9UNK0 236 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 LHX6Q9UPM6 363 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 PCDHGA2Q9Y5H1 932 aa11.07□□□□□ -0.64
NEDD1-211ENST00000557454 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 GSG1L2A8MUP6 293 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 GGPS1O95749 300 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 LGALS2P05162 132 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 SCG2P13521 617 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 CD52P31358 61 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 ARHGAP4P98171 946 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 ATP8B2P98198 1209 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 TFAP4Q01664 338 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 RING1Q06587 406 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 SPEM2Q0P670 501 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 ZNF528Q3MIS6 628 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 RUFY4Q6ZNE9 571 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 NSUN6Q8TEA1 469 aaKnown RBP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 LMBR1Q8WVP7 490 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 RSAD2Q8WXG1 361 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 MRPS27Q92552 414 aaKnown RBP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 TAAR1Q96RJ0 339 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 FOXQ1Q9C009 403 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 NGRNQ9NPE2 291 aaKnown RBP11.06□□□□□ -0.64
NEDD1-211ENST00000557454 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
NEDD1-211ENST00000557454 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 TBKBP1A7MCY6 615 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 GNAT1P11488 350 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 EIF2AK2P19525 551 aaKnown RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 CSTF1Q05048 431 aaKnown RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 USH1GQ495M9 461 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms