RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 C8orf37Q96NL8 207 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 TACO1Q9BSH4 297 aaKnown RBP6.61□□□□□ -1.35
VRK1-207ENST00000557352 DHRS4Q9BTZ2 278 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 SLC39A2Q9NP94 309 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 CATSPERZQ9NTU4 200 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 KDM2BQ8NHM5 1336 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.6□□□□□ -1.35
VRK1-207ENST00000557352 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 AMY2AP04746 511 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 PYGMP11217 842 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 PDE6AP16499 860 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
VRK1-207ENST00000557352 AMY2BP19961 511 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 CSF2RBP32927 897 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 GABREP78334 506 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 LONRF2Q1L5Z9 754 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 C16orf59Q7L2K0 433 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
VRK1-207ENST00000557352 OSTM1Q86WC4 334 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 DNERQ8NFT8 737 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
VRK1-207ENST00000557352 MEGF9Q9H1U4 602 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 CD248Q9HCU0 757 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 RIC8BQ9NVN3 520 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 CBLCQ9ULV8 474 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 PCDHA9Q9Y5H5 950 aa6.6□□□□□ -1.35
VRK1-207ENST00000557352 FAM221BA6H8Z2 402 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 H0Y858 1186 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 CNOT4O95628 575 aaKnown RBP6.59□□□□□ -1.35
VRK1-207ENST00000557352 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 NAT1P18440 290 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 ZXDAP98168 799 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 RBL2Q08999 1139 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 RASA3Q14644 834 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 GPR155Q7Z3F1 870 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 PTRH1Q86Y79 214 aaKnown RBP6.59□□□□□ -1.35
VRK1-207ENST00000557352 KATNBL1Q9H079 304 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
VRK1-207ENST00000557352 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.35
VRK1-207ENST00000557352 KRT15P19012 456 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 JAM2P57087 298 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 CDSNQ15517 529 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 LRP10Q7Z4F1 713 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 REXO1L1PQ8IX06 675 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 KISS1RQ969F8 398 aaPredicted RBP6.58□□□□□ -1.36
VRK1-207ENST00000557352 ARMC5Q96C12 935 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 SLC4A7Q9Y6M7 1214 aa6.58□□□□□ -1.36
VRK1-207ENST00000557352 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 AKAP8O43823 692 aaKnown RBP6.57□□□□□ -1.36
VRK1-207ENST00000557352 CRTAMO95727 393 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 ST5P78524 1137 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 CRY1Q16526 586 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 FIGNQ5HY92 759 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 ZC3H7AQ8IWR0 971 aaKnown RBP6.57□□□□□ -1.36
VRK1-207ENST00000557352 KRTAP17-1Q9BYP8 105 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 KLC2Q9H0B6 622 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 SEC61A2Q9H9S3 476 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 SNTG2Q9NY99 539 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 TSC22D4Q9Y3Q8 395 aa6.57□□□□□ -1.36
VRK1-207ENST00000557352 CCDC66A2RUB6 948 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 PATE3B3GLJ2 98 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 GSTA4O15217 222 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 ZNF888P0CJ79 500 aaPredicted RBP6.56□□□□□ -1.36
VRK1-207ENST00000557352 GJA4P35212 333 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 DNM2P50570 870 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 FAM47CQ5HY64 1035 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 ZNF585AQ6P3V2 769 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 EP400NLQ6ZTU2 488 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 WWC2-AS2Q96NR7 200 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 DEF6Q9H4E7 631 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 SLC52A2Q9HAB3 445 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 SMURF1Q9HCE7 757 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
VRK1-207ENST00000557352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 ESYT3A0FGR9 886 aa6.55□□□□□ -1.36
VRK1-207ENST00000557352 KCNK3O14649 394 aa6.55□□□□□ -1.36
VRK1-207ENST00000557352 C4BPAP04003 597 aaKnown RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 POLD1P28340 1107 aa6.55□□□□□ -1.36
VRK1-207ENST00000557352 LACTBP83111 547 aaPredicted RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 TOP3AQ13472 1001 aaPredicted RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 USP10Q14694 798 aaKnown RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 ZC3H12BQ5HYM0 836 aaKnown RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 DPP8Q6V1X1 898 aaPredicted RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 SH3RF3Q8TEJ3 882 aaPredicted RBP6.55□□□□□ -1.36
VRK1-207ENST00000557352 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
VRK1-207ENST00000557352 CARD11Q9BXL7 1154 aa6.55□□□□□ -1.36
VRK1-207ENST00000557352 CUTAO60888 179 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
VRK1-207ENST00000557352 ZNF623O75123 536 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 PTGS1P23219 599 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 SPRED1Q7Z699 444 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 IFNL2Q8IZJ0 200 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 GSTCDQ8NEC7 633 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 Q8TCH9 128 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 LMF1Q96S06 567 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 CDK5RAP1Q96SZ6 601 aaKnown RBP6.54□□□□□ -1.36
VRK1-207ENST00000557352 DNAJC7Q99615 494 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms