RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 KDM5DQ9BY66 1539 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 TADA3O75528 432 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 INHBBP09529 407 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 PI3P19957 117 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 GRK2P25098 689 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 GRK3P35626 688 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 EPHB3P54753 998 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 NKX3-2P78367 333 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 FOXO4P98177 505 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 DENND5AQ6IQ26 1287 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 NLGN4XQ8N0W4 816 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 TTLL11Q8NHH1 800 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 DACT3Q96B18 629 aaPredicted RBP5.55□□□□□ -1.52
CHD8-212ENST00000557329 KCNK12Q9HB15 430 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 TRPC5Q9UL62 973 aaPredicted RBP5.55□□□□□ -1.52
CHD8-212ENST00000557329 PCDHB4Q9Y5E5 795 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 LRRC9Q6ZRR7 1453 aa5.55□□□□□ -1.52
CHD8-212ENST00000557329 XIRP1Q702N8 1843 aaKnown RBP5.55□□□□□ -1.52
CHD8-212ENST00000557329 CDC42BPAQ5VT25 1732 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 ADGBQ8N7X0 1667 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 CCDC18Q5T9S5 1454 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 PLEKHH2Q8IVE3 1493 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 WNT9AO14904 365 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 SGSM2O43147 1006 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 NPTXRO95502 500 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 FPR2P25090 351 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 PMLP29590 882 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 PAK1Q13153 545 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 C2orf27AQ580R0 203 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 FAM47CQ5HY64 1035 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 TTLL7Q6ZT98 887 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
CHD8-212ENST00000557329 NLRP10Q86W26 655 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 TMEFF1Q8IYR6 380 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 LINC01356Q8N9X3 169 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.54□□□□□ -1.52
CHD8-212ENST00000557329 LRRC59Q96AG4 307 aaKnown RBP5.54□□□□□ -1.52
CHD8-212ENST00000557329 TOE1Q96GM8 510 aaKnown RBP5.54□□□□□ -1.52
CHD8-212ENST00000557329 PWWP2AQ96N64 755 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 DNAJC7Q99615 494 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 MRPL4Q9BYD3 311 aaKnown RBP5.54□□□□□ -1.52
CHD8-212ENST00000557329 PALD1Q9ULE6 856 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 MRPS23Q9Y3D9 190 aaKnown RBP5.54□□□□□ -1.52
CHD8-212ENST00000557329 PMF1-BGLAPU3KQ54 211 aa5.54□□□□□ -1.52
CHD8-212ENST00000557329 GPATCH8Q9UKJ3 1502 aaKnown RBP5.53□□□□□ -1.52
CHD8-212ENST00000557329 SMARCA5O60264 1052 aaPredicted RBP5.53□□□□□ -1.52
CHD8-212ENST00000557329 SASH1O94885 1247 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 SOD2P04179 222 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 GNAT1P11488 350 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 LCP1P13796 627 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 CTSWP56202 376 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 OTOP3Q7RTS5 596 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 DNAJC2Q99543 621 aaKnown RBP5.53□□□□□ -1.52
CHD8-212ENST00000557329 IRF2BPLQ9H1B7 796 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 DTLQ9NZJ0 730 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 MYOTQ9UBF9 498 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 PLXNC1O60486 1568 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 MTUS2Q5JR59 1369 aa5.53□□□□□ -1.52
CHD8-212ENST00000557329 CDK12Q9NYV4 1490 aaPredicted RBP5.52□□□□□ -1.53
CHD8-212ENST00000557329 FGD6Q6ZV73 1430 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 SH3D21A4FU49 640 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 B4E1Z4 1266 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 ARNTLO00327 626 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 KCNQ2O43526 872 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 FAM153BP0C7A2 387 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 HTRA3P83110 453 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 SSPNQ14714 243 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 NTRK3Q16288 839 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 TRIM61Q5EBN2 209 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 ERICH6BQ5W0A0 696 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 EP400NLQ6ZTU2 488 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 BRINP3Q76B58 766 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 LINC00482Q8N8I6 264 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 KISS1RQ969F8 398 aaPredicted RBP5.52□□□□□ -1.53
CHD8-212ENST00000557329 TMEM209Q96SK2 561 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 ZSWIM4Q9H7M6 989 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 LUC7LQ9NQ29 371 aaKnown RBP5.52□□□□□ -1.53
CHD8-212ENST00000557329 NTMQ9P121 344 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 FBLN5Q9UBX5 448 aa5.52□□□□□ -1.53
CHD8-212ENST00000557329 ARHGAP35Q9NRY4 1499 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 INO80Q9ULG1 1556 aaPredicted RBP5.51□□□□□ -1.53
CHD8-212ENST00000557329 KIAA1107Q9UPP5 1409 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 ZC3H13Q5T200 1668 aaKnown RBP5.51□□□□□ -1.53
CHD8-212ENST00000557329 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 DIAPH1O60610 1272 aaKnown RBP5.51□□□□□ -1.53
CHD8-212ENST00000557329 ATF2P15336 505 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 ST5P78524 1137 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 IDI1Q13907 227 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 R3HDM1Q15032 1099 aaKnown RBP5.51□□□□□ -1.53
CHD8-212ENST00000557329 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 SAPCD2Q86UD0 394 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 KYQ8NBH2 561 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 SMARCC2Q8TAQ2 1214 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 UHMK1Q8TAS1 419 aaKnown RBP5.51□□□□□ -1.53
CHD8-212ENST00000557329 FBXW5Q969U6 566 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 MAGEB10Q96LZ2 347 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms