RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 FGBP02675 491 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 CKBP12277 381 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 SMAD3P84022 425 aaKnown RBP25.48■■□□□ 1.67
PABPN1-206ENST00000556809 TRAF7Q6Q0C0 670 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 NEK8Q86SG6 692 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 FOXP1Q9H334 677 aaPredicted RBP25.48■■□□□ 1.67
PABPN1-206ENST00000556809 SMARCAD1Q9H4L7 1026 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 ERAP1Q9NZ08 941 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 IGKV6D-21A0A0A0MT36 114 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 TREHO43280 583 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 PFKMP08237 780 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 SELPP16109 830 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 PRR16Q569H4 304 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 MOXD1Q6UVY6 613 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 ATP6V0A1Q93050 837 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 ZNF577Q9BSK1 485 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 FOXD4L1Q9NU39 408 aa25.47■■□□□ 1.67
PABPN1-206ENST00000556809 CYP3A7-CYP3A51PA0A087WV96 503 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 H3BQV1 296 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 TDP2O95551 362 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 CYP3A7P24462 503 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 GNL2Q13823 731 aaKnown RBP25.46■■□□□ 1.67
PABPN1-206ENST00000556809 LETM2Q2VYF4 491 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 LARP1BQ659C4 914 aaKnown RBP25.46■■□□□ 1.67
PABPN1-206ENST00000556809 ABHD15Q6UXT9 468 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 LMBR1Q8WVP7 490 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 GLG1Q92896 1179 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 TBC1D22BQ9NU19 505 aa25.46■■□□□ 1.67
PABPN1-206ENST00000556809 CXXC1Q9P0U4 656 aaPredicted RBP25.46■■□□□ 1.67
PABPN1-206ENST00000556809 NRCAMQ92823 1304 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 DDX39AO00148 427 aaKnown RBP25.45■■□□□ 1.66
PABPN1-206ENST00000556809 LRRC8DQ7L1W4 858 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 OTOP2Q7RTS6 562 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 PLPPR4Q7Z2D5 763 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 DEFB128Q7Z7B8 93 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 MBOAT7Q96N66 472 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 UIMC1Q96RL1 719 aa25.45■■□□□ 1.66
PABPN1-206ENST00000556809 WDR81Q562E7 1941 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 MSH4O15457 936 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 GNAT1P11488 350 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 MARK3P27448 753 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 Q4G0T1 1027 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 ZNF618Q5T7W0 954 aa25.44■■□□□ 1.66
PABPN1-206ENST00000556809 FAM109BQ6ICB4 259 aaPredicted RBP25.44■■□□□ 1.66
PABPN1-206ENST00000556809 NAP1L4Q99733 375 aaKnown RBP25.44■■□□□ 1.66
PABPN1-206ENST00000556809 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 KIF28PB7ZC32 967 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 PARNO95453 639 aaKnown RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 CXCL10P02778 98 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 GCFC2P16383 781 aaKnown RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 PDCP20941 246 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 U2AF2P26368 475 aaKnown RBP eCLIP25.43■■□□□ 1.663e-7■■□□□ 12.6
PABPN1-206ENST00000556809 STAT5BP51692 787 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 PPP4R3AQ6IN85 833 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 NOSTRINQ8IVI9 506 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 AZI2Q9H6S1 392 aa25.43■■□□□ 1.66
PABPN1-206ENST00000556809 DDX25Q9UHL0 483 aaKnown RBP25.43■■□□□ 1.66
PABPN1-206ENST00000556809 CCNT1O60563 726 aaKnown RBP25.42■■□□□ 1.66
PABPN1-206ENST00000556809 NBNO60934 754 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 PPFIA1Q13136 1202 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 MBTPS1Q14703 1052 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 PLCB4Q15147 1175 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 MARCH8Q5T0T0 291 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 ZNF746Q6NUN9 644 aaPredicted RBP25.42■■□□□ 1.66
PABPN1-206ENST00000556809 Q7L0L9 218 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 SLC5A5Q92911 643 aa25.42■■□□□ 1.66
PABPN1-206ENST00000556809 MBLAC1A4D2B0 266 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-206ENST00000556809 THPOP40225 353 aa25.41■■□□□ 1.66
PABPN1-206ENST00000556809 GRIK4Q16099 956 aa25.41■■□□□ 1.66
PABPN1-206ENST00000556809 MCTP1Q6DN14 999 aa25.41■■□□□ 1.66
PABPN1-206ENST00000556809 CCDC60Q8IWA6 550 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-206ENST00000556809 RIT2Q99578 217 aa25.41■■□□□ 1.66
PABPN1-206ENST00000556809 MYH9P35579 1960 aaKnown RBP25.4■■□□□ 1.66
PABPN1-206ENST00000556809 SLC37A4O43826 429 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 CAND2O75155 1236 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 INSRRP14616 1297 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 SLC26A2P50443 739 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 KRT76Q01546 638 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 RPAINQ86UA6 219 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 SMAP1Q8IYB5 467 aaPredicted RBP25.4■■□□□ 1.66
PABPN1-206ENST00000556809 DEFB123Q8N688 67 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 MTIF3Q9H2K0 278 aaKnown RBP25.4■■□□□ 1.66
PABPN1-206ENST00000556809 GBF1Q92538 1859 aa25.4■■□□□ 1.66
PABPN1-206ENST00000556809 GRXCR1A8MXD5 290 aa25.39■■□□□ 1.66
PABPN1-206ENST00000556809 MIS18BP1Q6P0N0 1132 aa25.39■■□□□ 1.66
PABPN1-206ENST00000556809 RRN3P2A6NIE6 340 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 RSPH10B2B2RC85 870 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 RBAK-RBAKDNI3L0D1 243 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 PSMD10O75832 226 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 RSPH10BP0C881 870 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 ATP4AP20648 1035 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 SYT1P21579 422 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 TCTN1Q2MV58 587 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 SWSAP1Q6NVH7 229 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 B3GNT9Q6UX72 402 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 RUFY4Q6ZNE9 571 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 ETNPPLQ8TBG4 499 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 GJA10Q969M2 543 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms