RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 KAT6AQ92794 2004 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 H0Y858 1186 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 GLP2RO95838 553 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 CD52P31358 61 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 ICAM3P32942 547 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
ACTN1-219ENST00000556432 MGAT3Q09327 533 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 SPOUT1Q5T280 376 aaKnown RBP16.09■□□□□ 0.17
ACTN1-219ENST00000556432 NPAS4Q8IUM7 802 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 MTMR8Q96EF0 704 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-219ENST00000556432 PIGSQ96S52 555 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 KRT23Q9C075 422 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 TTC3P53804 2025 aa16.09■□□□□ 0.17
ACTN1-219ENST00000556432 DOCK5Q9H7D0 1870 aa16.08■□□□□ 0.17
ACTN1-219ENST00000556432 PER2O15055 1255 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 STAG3L1P0CL83 205 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 SP100P23497 879 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-219ENST00000556432 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-219ENST00000556432 IGBP1P78318 339 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 MRPS6P82932 125 aaKnown RBP16.08■□□□□ 0.16
ACTN1-219ENST00000556432 SEMA3FQ13275 785 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 GRIK4Q16099 956 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
ACTN1-219ENST00000556432 TICAM2Q86XR7 235 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 LINC01599Q8WXQ3 324 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 ASIC4Q96FT7 647 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 FAM49AQ9H0Q0 323 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-219ENST00000556432 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 LAMA4Q16363 1823 aa16.08■□□□□ 0.16
ACTN1-219ENST00000556432 M0QZ92 97 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 GATMP50440 423 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
ACTN1-219ENST00000556432 PTPN21Q16825 1174 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 GLG1Q92896 1179 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 AGO3Q9H9G7 860 aaKnown RBP16.07■□□□□ 0.16
ACTN1-219ENST00000556432 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
ACTN1-219ENST00000556432 RIF1Q5UIP0 2472 aaKnown RBP16.06■□□□□ 0.16
ACTN1-219ENST00000556432 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 SCG2P13521 617 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 ATF7P17544 494 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-219ENST00000556432 SDSP20132 328 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 PAK2Q13177 524 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 IER5Q5VY09 327 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 CWC27Q6UX04 472 aaKnown RBP16.06■□□□□ 0.16
ACTN1-219ENST00000556432 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-219ENST00000556432 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 CUL5Q93034 780 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 NEK1Q96PY6 1258 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
ACTN1-219ENST00000556432 KIAA1671Q9BY89 1806 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 PNMA6FA0A0J9YX94 578 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 PALM3A6NDB9 673 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-219ENST00000556432 PDGFBP01127 241 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-219ENST00000556432 TMEM62Q0P6H9 643 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 SENP7Q9BQF6 1050 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
ACTN1-219ENST00000556432 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
ACTN1-219ENST00000556432 GALR2O43603 387 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-219ENST00000556432 RPLP2P05387 115 aaKnown RBP16.04■□□□□ 0.16
ACTN1-219ENST00000556432 PCNX4Q63HM2 1172 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 RTN4RL1Q86UN2 441 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-219ENST00000556432 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 VN1R2Q8NFZ6 395 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 SUSD6Q92537 303 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 ZBTB10Q96DT7 871 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 TRPV2Q9Y5S1 764 aa16.04■□□□□ 0.16
ACTN1-219ENST00000556432 FAM186AA6NE01 2351 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-219ENST00000556432 TECP42680 631 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 GRM4Q14833 912 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 MARCH8Q5T0T0 291 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 ASCL5Q7RTU5 278 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 RIPOR3Q96MK2 946 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 CDCA3Q99618 268 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-219ENST00000556432 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 TRPC6Q9Y210 931 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 PCDHB7Q9Y5E2 793 aa16.03■□□□□ 0.16
ACTN1-219ENST00000556432 CACNA1AO00555 2505 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 FGF18O76093 207 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms