RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 PDCL2Q8N4E4 241 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 CCDC82Q8N4S0 544 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ETNPPLQ8TBG4 499 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 AFAP1L1Q8TED9 768 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 PIBF1Q8WXW3 757 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 SLC5A5Q92911 643 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 FERMT2Q96AC1 680 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 CEP89Q96ST8 783 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 LLPHQ9BRT6 129 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 NOC4LQ9BVI4 516 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 TMEM121BQ9BXQ6 578 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 AP5M1Q9H0R1 490 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 STARD7Q9NQZ5 370 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 KCNH7Q9NS40 1196 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 KIF3AQ9Y496 699 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 TRIP12Q14669 1992 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 REV3LO60673 3130 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 MBLAC1A4D2B0 266 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ZBTB42B2RXF5 422 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ZEB2O60315 1214 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 STBD1O95210 358 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 BAG4O95429 457 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ARP10275 920 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 FXR1P51114 621 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 GABPB1Q06547 395 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 SSRP1Q08945 709 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 NEDD9Q14511 834 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 DGKDQ16760 1214 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 NBPF20Q3BBV1 942 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 LRIT3Q3SXY7 679 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 CEP55Q53EZ4 464 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 HABP4Q5JVS0 413 aaKnown RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 MARCH8Q5T0T0 291 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 GDF6Q6KF10 455 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 FCHSD1Q86WN1 690 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 KCTD17Q8N5Z5 321 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 GIMAP8Q8ND71 665 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 WNT8BQ93098 351 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 PGBD1Q96JS3 809 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 KCNMB3Q9NPA1 279 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 VPS54Q9P1Q0 977 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 GTF2IRD1Q9UHL9 959 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 LIMCH1Q9UPQ0 1083 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 NR2E3Q9Y5X4 410 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 ATG2AQ2TAZ0 1938 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 MICAL3Q7RTP6 2002 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 COL4A4P53420 1690 aaPredicted RBP4.44□□□□□ -1.7
LINC00648-202ENST00000555985 LOXHD1Q8IVV2 1947 aa4.44□□□□□ -1.7
LINC00648-202ENST00000555985 GTPBP6O43824 516 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GGPS1O95749 300 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CXCL10P02778 98 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 LGALS2P05162 132 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 NEK4P51957 841 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SPIRE1Q08AE8 756 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MTMR1Q13613 665 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 RABEP1Q15276 862 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GNPTABQ3T906 1256 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 FAM26DQ5JW98 314 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PPP4R3AQ6IN85 833 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MFSD5Q6N075 450 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GPR153Q6NV75 609 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ABHD15Q6UXT9 468 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 DHX37Q8IY37 1157 aaKnown RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 BLIDQ8IZY5 108 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 REXO1Q8N1G1 1221 aaKnown RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 LINC01465Q8N7H1 131 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 NECAB1Q8N987 351 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CCDC148Q8NFR7 591 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 OXER1Q8TDS5 423 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CCDC12Q8WUD4 166 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CDHR1Q96JP9 859 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GLT1D1Q96MS3 346 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SPC25Q9HBM1 224 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 C6orf50Q9HD87 102 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GJB4Q9NTQ9 266 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MRVI1Q9Y6F6 885 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 IGSF9BQ9UPX0 1349 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 TRANK1O15050 2925 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CCDC66A2RUB6 948 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SPDYE3A6NKU9 549 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SOX1O00570 391 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 WNT7AO00755 349 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 JAK2O60674 1132 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PSMD10O75832 226 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CDKL5O76039 1030 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MMP1P03956 469 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MYCLP12524 364 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ATP4AP20648 1035 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 GNA11P29992 359 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PSEN2P49810 448 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SETQ01105 290 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MGAT3Q09327 533 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CUL4AQ13619 759 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MFSD10Q14728 455 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 TCTN1Q2MV58 587 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CAVIN1Q6NZI2 390 aaKnown RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CYFIP1Q7L576 1253 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PLPPR4Q7Z2D5 763 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 NLRX1Q86UT6 975 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms