RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 TRIM50Q86XT4 487 aa25.84■■□□□ 1.73
CDKN3-208ENST00000555837 FAM167AQ96KS9 214 aa25.84■■□□□ 1.73
CDKN3-208ENST00000555837 CEP131Q9UPN4 1083 aa25.84■■□□□ 1.73
CDKN3-208ENST00000555837 DOCK5Q9H7D0 1870 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 IGKV6D-21A0A0A0MT36 114 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 BTBD18B2RXH4 712 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 HBP1O60381 514 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 DKC1O60832 514 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDKN3-208ENST00000555837 CSF2RAP15509 400 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 ORC2Q13416 577 aaPredicted RBP25.83■■□□□ 1.73
CDKN3-208ENST00000555837 PDXDC2PQ6P474 469 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 CKAP2LQ8IYA6 745 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 OXER1Q8TDS5 423 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 GJB4Q9NTQ9 266 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 SMC3Q9UQE7 1217 aa25.83■■□□□ 1.73
CDKN3-208ENST00000555837 TDP2O95551 362 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 FGBP02675 491 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 IQCF3P0C7M6 154 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 CCL23P55773 120 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 NR5A1Q13285 461 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 RNPC3Q96LT9 517 aaKnown RBP25.82■■□□□ 1.72
CDKN3-208ENST00000555837 DISC1Q9NRI5 854 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 SETD4Q9NVD3 440 aa25.82■■□□□ 1.72
CDKN3-208ENST00000555837 NOL7Q9UMY1 257 aaKnown RBP25.82■■□□□ 1.72
CDKN3-208ENST00000555837 POTEB3A0JP26 581 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 CCNE2O96020 404 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 MARK3P27448 753 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 GRIK4Q16099 956 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 SWSAP1Q6NVH7 229 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 POTEBQ6S5H4 581 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 LRRC8DQ7L1W4 858 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 COL1A2P08123 1366 aa25.81■■□□□ 1.72
CDKN3-208ENST00000555837 CKBP12277 381 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 TRAPPC10P48553 1259 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 ZNF484Q5JVG2 852 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 GPR153Q6NV75 609 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 MIER3Q7Z3K6 550 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 ATP8B4Q8TF62 1192 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 LMBR1Q8WVP7 490 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 BBXQ8WY36 941 aaPredicted RBP25.8■■□□□ 1.72
CDKN3-208ENST00000555837 TNFRSF25Q93038 417 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 NRBP2Q9NSY0 501 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 TUBE1Q9UJT0 475 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 MAFBQ9Y5Q3 323 aaPredicted RBP25.8■■□□□ 1.72
CDKN3-208ENST00000555837 KAT6AQ92794 2004 aa25.8■■□□□ 1.72
CDKN3-208ENST00000555837 H3BQV1 296 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 PSMD10O75832 226 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 THPOP40225 353 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 FOSBP53539 338 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 SHHQ15465 462 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 RPAINQ86UA6 219 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 ETNPPLQ8TBG4 499 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 WNT8AQ9H1J5 351 aa25.79■■□□□ 1.72
CDKN3-208ENST00000555837 TREHO43280 583 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 EFCAB14O75071 495 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 INSRRP14616 1297 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 PDCP20941 246 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 PLCB4Q15147 1175 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 FAM43BQ6ZT52 329 aaPredicted RBP25.78■■□□□ 1.72
CDKN3-208ENST00000555837 PCYT2Q99447 389 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 FTOQ9C0B1 505 aaKnown RBP eCLIP25.78■■□□□ 1.72
CDKN3-208ENST00000555837 KCNMB3Q9NPA1 279 aa25.78■■□□□ 1.72
CDKN3-208ENST00000555837 RSPH10B2B2RC85 870 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 M0QZ92 97 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 NEMFO60524 1076 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 RSPH10BP0C881 870 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 ADAM17P78536 824 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 GUCY1B3Q02153 619 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 NOSTRINQ8IVI9 506 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 CCDC60Q8IWA6 550 aaPredicted RBP25.77■■□□□ 1.72
CDKN3-208ENST00000555837 ZNF710Q8N1W2 664 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 PPP1R13LQ8WUF5 828 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 GABBR1Q9UBS5 961 aa25.77■■□□□ 1.72
CDKN3-208ENST00000555837 MBLAC1A4D2B0 266 aaPredicted RBP25.76■■□□□ 1.71
CDKN3-208ENST00000555837 CHMP2AO43633 222 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 EDIL3O43854 480 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 BAIAP3O94812 1187 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 PPP2R5CQ13362 524 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 CALCRLQ16602 461 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 TMEM240Q5SV17 173 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 IER5Q5VY09 327 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 ZNF365Q70YC5 407 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 NME8Q8N427 588 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 HERVK_113Q902F9 699 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 SCLYQ96I15 445 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 CTAGE1Q96RT6 745 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.76■■□□□ 1.71
CDKN3-208ENST00000555837 TELO2Q9Y4R8 837 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 UMODL1Q5DID0 1318 aa25.76■■□□□ 1.71
CDKN3-208ENST00000555837 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.75■■□□□ 1.71
CDKN3-208ENST00000555837 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.75■■□□□ 1.71
CDKN3-208ENST00000555837 MAGEB2O15479 319 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 SLC37A4O43826 429 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 DTNBO60941 627 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 GJB2P29033 226 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 ZNF200P98182 395 aaPredicted RBP25.75■■□□□ 1.71
CDKN3-208ENST00000555837 UNC45AQ9H3U1 944 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 PCDHA12Q9UN75 941 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 PCDHA2Q9Y5H9 948 aa25.75■■□□□ 1.71
CDKN3-208ENST00000555837 IGSF9BQ9UPX0 1349 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms