RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ERAP1Q9NZ08 941 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 SLC9A2Q9UBY0 812 aa10.92□□□□□ -0.66
ACTN1-215ENST00000555616 DOCK5Q9H7D0 1870 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 NRCAMQ92823 1304 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 GRXCR1A8MXD5 290 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 TREHO43280 583 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 NBNO60934 754 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 BAIAP3O94812 1187 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 ZSCAN22P10073 491 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-215ENST00000555616 GNAT1P11488 350 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 ACTN1P12814 892 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 CIITAP33076 1130 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 ACTR2P61160 394 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 GNL2Q13823 731 aaKnown RBP10.91□□□□□ -0.66
ACTN1-215ENST00000555616 MBTPS1Q14703 1052 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 RAB30Q15771 203 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 ZNF618Q5T7W0 954 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 KRT40Q6A162 431 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 GALNT17Q6IS24 598 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 PLA2G4DQ86XP0 818 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 RASGRP4Q8TDF6 673 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 ATP6V0A1Q93050 837 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 LENG9Q96B70 501 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 AIFM3Q96NN9 605 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 PCYT2Q99447 389 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 RNPEPQ9H4A4 650 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 SMARCAD1Q9H4L7 1026 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 SETD4Q9NVD3 440 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 MTMR6Q9Y217 621 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 MYH7BA7E2Y1 1941 aa10.91□□□□□ -0.66
ACTN1-215ENST00000555616 CDH23Q9H251 3354 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 DHX15O43143 795 aaKnown RBP10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ATG7O95352 703 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 BRD1O95696 1058 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 CCNE2O96020 404 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 MMP1P03956 469 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ATP2A2P16615 1042 aaKnown RBP10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ZNF76P36508 570 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 PBX2P40425 430 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 NLRP5P59047 1200 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 PPFIA1Q13136 1202 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 NPY5RQ15761 445 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 MCTP1Q6DN14 999 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 SLC17A8Q8NDX2 589 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 GLG1Q92896 1179 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 FAM161BQ96MY7 647 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 SLC9A7Q96T83 725 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 FTOQ9C0B1 505 aaKnown RBP eCLIP10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ZSCAN16Q9H4T2 348 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-215ENST00000555616 PCDHA4Q9UN74 947 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 ATP6V1DQ9Y5K8 247 aa10.9□□□□□ -0.66
ACTN1-215ENST00000555616 SCN5AQ14524 2016 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-215ENST00000555616 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 M0R2N6 131 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 IPO5O00410 1097 aaKnown RBP10.89□□□□□ -0.67
ACTN1-215ENST00000555616 EDIL3O43854 480 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 F13A1P00488 732 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 MARK3P27448 753 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 KRT2P35908 639 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 THPOP40225 353 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 SLC26A2P50443 739 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-215ENST00000555616 PKP1Q13835 747 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 GRIK4Q16099 956 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 CNKSR3Q6P9H4 555 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 PLPPR4Q7Z2D5 763 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 RPAINQ86UA6 219 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 PHOSPHO2Q8TCD6 241 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 CDX2Q99626 313 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-215ENST00000555616 ZNF577Q9BSK1 485 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 AZI2Q9H6S1 392 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 GJB4Q9NTQ9 266 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 YBX2Q9Y2T7 364 aaKnown RBP10.89□□□□□ -0.67
ACTN1-215ENST00000555616 PCDHA11Q9Y5I1 949 aa10.89□□□□□ -0.67
ACTN1-215ENST00000555616 DLL1O00548 723 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 EFCAB14O75071 495 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 USP11P51784 963 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 WDR5P61964 334 aaKnown RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 TCTN1Q2MV58 587 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 PRR16Q569H4 304 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 FAM26DQ5JW98 314 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 MARCH8Q5T0T0 291 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 ZNF746Q6NUN9 644 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 ABHD15Q6UXT9 468 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 BRAPQ7Z569 592 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 DIS3L2Q8IYB7 885 aaKnown RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 BLIDQ8IZY5 108 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms