RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 RILPL2Q969X0 211 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 MTMR8Q96EF0 704 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 RIPOR3Q96MK2 946 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 PIGSQ96S52 555 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 MAP3K20Q9NYL2 800 aaKnown RBP9.7□□□□□ -0.86
NEK9-206ENST00000555537 MAD2L2Q9UI95 211 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 CDH22Q9UJ99 828 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
NEK9-206ENST00000555537 TRPC6Q9Y210 931 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 ZMYM6O95789 1325 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 NRCAMQ92823 1304 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 PLXNA3P51805 1871 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 ATP9AO75110 1047 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 FOXK2Q01167 660 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 GRIK4Q16099 956 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 PTPN21Q16825 1174 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 GNPTABQ3T906 1256 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 NAALADL2Q58DX5 795 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 CCDC178Q5BJE1 867 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 MARCH8Q5T0T0 291 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 TSHZ1Q6ZSZ6 1077 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 CMTR2Q8IYT2 770 aaKnown RBP9.69□□□□□ -0.86
NEK9-206ENST00000555537 SUSD6Q92537 303 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 INPP4AQ96PE3 977 aaPredicted RBP9.69□□□□□ -0.86
NEK9-206ENST00000555537 FAM49AQ9H0Q0 323 aaPredicted RBP9.69□□□□□ -0.86
NEK9-206ENST00000555537 SMOC2Q9H3U7 446 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
NEK9-206ENST00000555537 KIAA1671Q9BY89 1806 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 GSTTP1A0A1W2PQM5 241 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
NEK9-206ENST00000555537 PRR23AA6NEV1 266 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 PROB1E7EW31 1015 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 FIBPO43427 364 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 SDSP20132 328 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TCF7P36402 384 aaPredicted RBP9.68□□□□□ -0.86
NEK9-206ENST00000555537 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TMEM266Q2M3C6 531 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 SPOUT1Q5T280 376 aaKnown RBP9.68□□□□□ -0.86
NEK9-206ENST00000555537 IFIT1BQ5T764 474 aaKnown RBP9.68□□□□□ -0.86
NEK9-206ENST00000555537 LLGL2Q6P1M3 1020 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TAF2Q6P1X5 1199 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 RSPH3Q86UC2 560 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TMEM105Q8N8V8 129 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 ATP8B4Q8TF62 1192 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 S1PR5Q9H228 398 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TMX1Q9H3N1 280 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TSHZ2Q9NRE2 1034 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
NEK9-206ENST00000555537 TUBE1Q9UJT0 475 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 PADI3Q9ULW8 664 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 TTC3P53804 2025 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 PLXNA4Q9HCM2 1894 aa9.68□□□□□ -0.86
NEK9-206ENST00000555537 DMDP11532 3685 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 GALR2O43603 387 aaPredicted RBP9.67□□□□□ -0.86
NEK9-206ENST00000555537 CYTH3O43739 400 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 ARP10275 920 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 ATF7P17544 494 aaPredicted RBP9.67□□□□□ -0.86
NEK9-206ENST00000555537 TECP42680 631 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 MRPS6P82932 125 aaKnown RBP9.67□□□□□ -0.86
NEK9-206ENST00000555537 SEC23AQ15436 765 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 DUSP6Q16828 381 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 FAM102BQ5T8I3 360 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 SYCE2Q6PIF2 218 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 USP17L6PQ6QN14 398 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 CWC27Q6UX04 472 aaKnown RBP9.67□□□□□ -0.86
NEK9-206ENST00000555537 CYB5R4Q7L1T6 521 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 SAMD3Q8N6K7 520 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 KREMEN2Q8NCW0 462 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 GLG1Q92896 1179 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 NEK1Q96PY6 1258 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 RIOX1Q9H6W3 641 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 LRFN2Q9ULH4 789 aa9.67□□□□□ -0.86
NEK9-206ENST00000555537 PNMA6FA0A0J9YX94 578 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 MBLAC1A4D2B0 266 aaPredicted RBP9.66□□□□□ -0.86
NEK9-206ENST00000555537 TBKBP1A7MCY6 615 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 MGEA5O60502 916 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 FGF18O76093 207 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 BRD1O95696 1058 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 STAG3L1P0CL83 205 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 SCG2P13521 617 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 INSRRP14616 1297 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 ID4P47928 161 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
NEK9-206ENST00000555537 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 ANKRD54Q6NXT1 300 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 FRMD5Q7Z6J6 570 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 SEPT1Q8WYJ6 367 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 SENP7Q9BQF6 1050 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
NEK9-206ENST00000555537 TMEM260Q9NX78 707 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 ERAP1Q9NZ08 941 aa9.66□□□□□ -0.86
NEK9-206ENST00000555537 PCDHB7Q9Y5E2 793 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms