RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RTN1Q16799 776 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 UTP14CQ5TAP6 766 aaKnown RBP16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 SYNE3Q6ZMZ3 975 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 FAM178BQ8IXR5 827 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 GJD3Q8N144 294 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 MRPL38Q96DV4 380 aaKnown RBP16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 SAMD11Q96NU1 681 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 C11orf16Q9NQ32 467 aa16.03■□□□□ 0.16
SPTLC2-202ENST00000554365 FIBPO43427 364 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 CAND2O75155 1236 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 HOXC8P31273 242 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 MRPS9P82933 396 aaKnown RBP16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 GPM6BQ13491 265 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 NEDD9Q14511 834 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 METTL7BQ6UX53 244 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 TOP1MTQ969P6 601 aa16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 ZNF215Q9UL58 517 aaPredicted RBP16.02■□□□□ 0.16
SPTLC2-202ENST00000554365 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.15
SPTLC2-202ENST00000554365 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 SPATA31C2B4DYI2 1134 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 H3BQ06 376 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 JAK2O60674 1132 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 STAM2O75886 525 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 ICAM3P32942 547 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 ARHGAP4P98171 946 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 SEMA3FQ13275 785 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 TIGD5Q53EQ6 642 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 TMEM192Q8IY95 271 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 GPR20Q99678 358 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 RBM28Q9NW13 759 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 TELO2Q9Y4R8 837 aa16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 ARIH1Q9Y4X5 557 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 BAZ2BQ9UIF8 2168 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-202ENST00000554365 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
SPTLC2-202ENST00000554365 H3BNC9 293 aa16■□□□□ 0.15
SPTLC2-202ENST00000554365 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
SPTLC2-202ENST00000554365 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
SPTLC2-202ENST00000554365 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
SPTLC2-202ENST00000554365 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
SPTLC2-202ENST00000554365 APBB2Q92870 758 aa16■□□□□ 0.15
SPTLC2-202ENST00000554365 LLPHQ9BRT6 129 aaKnown RBP16■□□□□ 0.15
SPTLC2-202ENST00000554365 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
SPTLC2-202ENST00000554365 CNTNAP5Q8WYK1 1306 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 GRXCR2A6NFK2 248 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 IFNAR1P17181 557 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 KIF5BP33176 963 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 LMBR1Q8WVP7 490 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 CUL5Q93034 780 aa15.99■□□□□ 0.15
SPTLC2-202ENST00000554365 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 PPFIA3O75145 1194 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 CTNNB1P35222 781 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 PUS10Q3MIT2 529 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 FAM26DQ5JW98 314 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 PCNX4Q63HM2 1172 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 FIBCD1Q8N539 461 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 PHKBQ93100 1093 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 PABPC5Q96DU9 382 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 NSUN3Q9H649 340 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 BRWD1Q9NSI6 2320 aa15.98■□□□□ 0.15
SPTLC2-202ENST00000554365 NRCAMQ92823 1304 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 GHRP10912 638 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 DDIT3P35638 169 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 TCF7P36402 384 aaPredicted RBP15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 GNAQP50148 359 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 ADAM17P78536 824 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 RRP36Q96EU6 259 aaKnown RBP15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 UIMC1Q96RL1 719 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 SENP7Q9BQF6 1050 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 SPZ1Q9BXG8 430 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 CLDND1Q9NY35 253 aa15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.97■□□□□ 0.15
SPTLC2-202ENST00000554365 STK36Q9NRP7 1315 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 COL4A6Q14031 1691 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 CPLX1O14810 134 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 CSPG5O95196 566 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 CHRNA1P02708 482 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 ALADP13716 330 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 MARK3P27448 753 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 SMARCA1P28370 1054 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 GJB2P29033 226 aa15.96■□□□□ 0.15
SPTLC2-202ENST00000554365 CSPP1Q1MSJ5 1256 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms