RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
CHD8-206ENST00000553870 FOSBP53539 338 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 RBL2Q08999 1139 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 PPP2R5CQ13362 524 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 PPIGQ13427 754 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD8-206ENST00000553870 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
CHD8-206ENST00000553870 SWSAP1Q6NVH7 229 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 B3GNT9Q6UX72 402 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 HSCBQ8IWL3 235 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 RETREG2Q8NC44 543 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 NOC4LQ9BVI4 516 aaKnown RBP10.54□□□□□ -0.72
CHD8-206ENST00000553870 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 ZNF302Q9NR11 478 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 DISC1Q9NRI5 854 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 TELO2Q9Y4R8 837 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 SAMM50Q9Y512 469 aa10.54□□□□□ -0.72
CHD8-206ENST00000553870 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
CHD8-206ENST00000553870 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 BACH1O14867 736 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 SLC37A4O43826 429 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 HBP1O60381 514 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.729e-32■■■■■ 60.5
CHD8-206ENST00000553870 CAND2O75155 1236 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 ITGB8P26012 769 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 RFC2P35250 354 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 ADAM17P78536 824 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 FPGSQ05932 587 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 PPFIA1Q13136 1202 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 PLCB4Q15147 1175 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 RILPL1Q5EBL4 403 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 TAF2Q6P1X5 1199 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 MIER3Q7Z3K6 550 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 RPAINQ86UA6 219 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 RPUSD2Q8IZ73 545 aaKnown RBP10.53□□□□□ -0.72
CHD8-206ENST00000553870 BBXQ8WY36 941 aaPredicted RBP10.53□□□□□ -0.72
CHD8-206ENST00000553870 HAS1Q92839 578 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 BADQ92934 168 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 ATP6V0A1Q93050 837 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 FAM167AQ96KS9 214 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 NRBP2Q9NSY0 501 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
CHD8-206ENST00000553870 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.73
CHD8-206ENST00000553870 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 NEMFO60524 1076 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 PFKMP08237 780 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 CYP2C9P11712 490 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 INSRRP14616 1297 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.73
CHD8-206ENST00000553870 CALCRLQ16602 461 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 LMBR1Q8WVP7 490 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 MTMR9Q96QG7 549 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 CTAGE1Q96RT6 745 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.73
CHD8-206ENST00000553870 SETD4Q9NVD3 440 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 GABBR1Q9UBS5 961 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 CEP131Q9UPN4 1083 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 TRPC6Q9Y210 931 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
CHD8-206ENST00000553870 COL1A2P08123 1366 aa10.52□□□□□ -0.73
CHD8-206ENST00000553870 CEP290O15078 2479 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 KIF28PB7ZC32 967 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 LAD1O00515 517 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 TREHO43280 583 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
CHD8-206ENST00000553870 IQCF3P0C7M6 154 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 SELPP16109 830 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 CYP2C18P33260 490 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 MCM7P33993 719 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 PSMC5P62195 406 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 EPHA7Q15375 998 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 GRIK4Q16099 956 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 TTC38Q5R3I4 469 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 FAM43BQ6ZT52 329 aaPredicted RBP10.51□□□□□ -0.73
CHD8-206ENST00000553870 BRAPQ7Z569 592 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 RSPH3Q86UC2 560 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 CCDC60Q8IWA6 550 aaPredicted RBP10.51□□□□□ -0.73
CHD8-206ENST00000553870 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 NME8Q8N427 588 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 IL23AQ9NPF7 189 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 VAV3Q9UKW4 847 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 DOCK5Q9H7D0 1870 aa10.51□□□□□ -0.73
CHD8-206ENST00000553870 SMIM35A0A1B0GVV1 85 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 MAGEB2O15479 319 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 CHMP2AO43633 222 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 HSP90AA1P07900 732 aaKnown RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 CKBP12277 381 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms