RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
PRPF39-204ENST00000553605 FGAP02671 866 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CCND2P30279 289 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CD52P31358 61 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
PRPF39-204ENST00000553605 PDE12Q6L8Q7 609 aaKnown RBP16.05■□□□□ 0.16
PRPF39-204ENST00000553605 METTL7BQ6UX53 244 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 CDY2AQ9Y6F7 541 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 ZNF292O60281 2723 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 PLXNA4Q9HCM2 1894 aa16.05■□□□□ 0.16
PRPF39-204ENST00000553605 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 HOXB8P17481 243 aaPredicted RBP16.04■□□□□ 0.16
PRPF39-204ENST00000553605 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
PRPF39-204ENST00000553605 GATMP50440 423 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 NEDD9Q14511 834 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 PUM1Q14671 1186 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRPF39-204ENST00000553605 SPOUT1Q5T280 376 aaKnown RBP16.04■□□□□ 0.16
PRPF39-204ENST00000553605 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 PNMA1Q8ND90 353 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 DNAJB3Q8WWF6 145 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
PRPF39-204ENST00000553605 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 FGF18O76093 207 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 ASPRV1Q53RT3 343 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 MFSD6Q6ZSS7 791 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 KIAA2013Q8IYS2 634 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 MIER1Q8N108 512 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 FLCNQ8NFG4 579 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 RASGRP4Q8TDF6 673 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 TMEM260Q9NX78 707 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 LRFN2Q9ULH4 789 aa16.03■□□□□ 0.16
PRPF39-204ENST00000553605 FSCN2O14926 492 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 LMNAP02545 664 aaKnown RBP16.02■□□□□ 0.16
PRPF39-204ENST00000553605 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
PRPF39-204ENST00000553605 SCG2P13521 617 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 HAND2P61296 217 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 SEMA4AQ9H3S1 761 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 POMKQ9H5K3 350 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 CDH22Q9UJ99 828 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 SQORQ9Y6N5 450 aa16.02■□□□□ 0.16
PRPF39-204ENST00000553605 SPATA31C2B4DYI2 1134 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 PI15O43692 258 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 ASGR2P07307 311 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 MRPS6P82932 125 aaKnown RBP16.01■□□□□ 0.15
PRPF39-204ENST00000553605 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 PLPP4Q5VZY2 271 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
PRPF39-204ENST00000553605 CES5AQ6NT32 575 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 CCDC105Q8IYK2 499 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 NECTIN4Q96NY8 510 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 KAT6AQ92794 2004 aa16.01■□□□□ 0.15
PRPF39-204ENST00000553605 EP300Q09472 2414 aaPredicted RBP16■□□□□ 0.15
PRPF39-204ENST00000553605 EPG5Q9HCE0 2579 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 MYH6P13533 1939 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
PRPF39-204ENST00000553605 CCER2I3L3R5 266 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
PRPF39-204ENST00000553605 AOC1P19801 751 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 IBSPP21815 317 aaPredicted RBP16■□□□□ 0.15
PRPF39-204ENST00000553605 SP4Q02446 784 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 APOBRQ0VD83 1088 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 GRIK4Q16099 956 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 IER5Q5VY09 327 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 FCHSD1Q86WN1 690 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 ESR2Q92731 530 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 ADAM7Q9H2U9 754 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 LIMD1Q9UGP4 676 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 PCDHB7Q9Y5E2 793 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
PRPF39-204ENST00000553605 MBLAC1A4D2B0 266 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 FIBPO43427 364 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 STAM2O75886 525 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 RPLP2P05387 115 aaKnown RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 ITIH3Q06033 890 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms