RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MYH9P35579 1960 aaKnown RBP25.76■■□□□ 1.72
TDP1-206ENST00000553569 IGKV6D-21A0A0A0MT36 114 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 PSAPP07602 524 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 CCL23P55773 120 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 PPFIA1Q13136 1202 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 SWSAP1Q6NVH7 229 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 ATP6V0A1Q93050 837 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 SNX21Q969T3 373 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 PCDHA10Q9Y5I2 948 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 WDR81Q562E7 1941 aa25.76■■□□□ 1.71
TDP1-206ENST00000553569 TANC1Q9C0D5 1861 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 FPGSQ05932 587 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 MFSD5Q6N075 450 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 PDXDC2PQ6P474 469 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 PLPPR4Q7Z2D5 763 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 LMBR1Q8WVP7 490 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 DHX38Q92620 1227 aaKnown RBP25.75■■□□□ 1.71
TDP1-206ENST00000553569 FAM20AQ96MK3 541 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 PRO3102Q9H379 93 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 DISC1Q9NRI5 854 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 GABBR1Q9UBS5 961 aa25.75■■□□□ 1.71
TDP1-206ENST00000553569 NEMFO60524 1076 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 HOXC8P31273 242 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 MCM7P33993 719 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 JAK3P52333 1124 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 BFSP2Q13515 415 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 PLCB4Q15147 1175 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 GRIK4Q16099 956 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 LARP1BQ659C4 914 aaKnown RBP25.74■■□□□ 1.71
TDP1-206ENST00000553569 MIER3Q7Z3K6 550 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 CKAP2LQ8IYA6 745 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 TMEM199Q8N511 208 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 CCDC155Q8N6L0 562 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 AFAP1L1Q8TED9 768 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 HAS1Q92839 578 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 WNT8AQ9H1J5 351 aa25.74■■□□□ 1.71
TDP1-206ENST00000553569 NOL7Q9UMY1 257 aaKnown RBP25.74■■□□□ 1.71
TDP1-206ENST00000553569 NRCAMQ92823 1304 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 TBX3O15119 743 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 TREHO43280 583 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 BAG4O95429 457 aaKnown RBP25.73■■□□□ 1.71
TDP1-206ENST00000553569 GNAT1P11488 350 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 CSF2RAP15509 400 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 U2AF2P26368 475 aaKnown RBP eCLIP25.73■■□□□ 1.71
TDP1-206ENST00000553569 SFNP31947 248 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 BMP8BP34820 402 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 IGBP1P78318 339 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 PTK7Q13308 1070 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 CALCRLQ16602 461 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 WNT8BQ93098 351 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 SCLYQ96I15 445 aa25.73■■□□□ 1.71
TDP1-206ENST00000553569 IGSF9BQ9UPX0 1349 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 POTEB3A0JP26 581 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 SLC26A2P50443 739 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 TTC38Q5R3I4 469 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 POTEBQ6S5H4 581 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 TRMT1LQ7Z2T5 733 aaKnown RBP25.72■■□□□ 1.71
TDP1-206ENST00000553569 RETREG2Q8NC44 543 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 CAGE1Q8TC20 777 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 VAV3Q9UKW4 847 aa25.72■■□□□ 1.71
TDP1-206ENST00000553569 SCN5AQ14524 2016 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 PITPNM1O00562 1244 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 INSRRP14616 1297 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 EPHB4P54760 987 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 PPIGQ13427 754 aaKnown RBP eCLIP25.71■■□□□ 1.71
TDP1-206ENST00000553569 NBR1Q14596 966 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 ZNF174Q15697 407 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 B3GNT9Q6UX72 402 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 SERINC5Q86VE9 423 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 SLFN12Q8IYM2 578 aa25.71■■□□□ 1.71
TDP1-206ENST00000553569 INTS4Q96HW7 963 aaKnown RBP25.71■■□□□ 1.71
TDP1-206ENST00000553569 PPP2R5CQ13362 524 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 UGCGQ16739 394 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 RDM1Q8NG50 284 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 ATP8B4Q8TF62 1192 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 TRAPPC12Q8WVT3 735 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 TUBE1Q9UJT0 475 aa25.7■■□□□ 1.7
TDP1-206ENST00000553569 MAFBQ9Y5Q3 323 aaPredicted RBP25.7■■□□□ 1.7
TDP1-206ENST00000553569 VPS37CA5D8V6 355 aaPredicted RBP25.69■■□□□ 1.7
TDP1-206ENST00000553569 EML1O00423 815 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 ACRP10323 421 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 CKBP12277 381 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 ATP4AP20648 1035 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 TRAPPC10P48553 1259 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 ADAM17P78536 824 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 TRIM71Q2Q1W2 868 aaKnown RBP25.69■■□□□ 1.7
TDP1-206ENST00000553569 NCAPH2Q6IBW4 605 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 TNPO1Q92973 898 aaKnown RBP25.69■■□□□ 1.7
TDP1-206ENST00000553569 ZBTB10Q96DT7 871 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 TMEM60Q9H2L4 133 aa25.69■■□□□ 1.7
TDP1-206ENST00000553569 RRN3P2A6NIE6 340 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 HBP1O60381 514 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 THPOP40225 353 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 PRKCEQ02156 737 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 RUFY4Q6ZNE9 571 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 LRRC8DQ7L1W4 858 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 TDHQ8IZJ6 230 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 BANK1Q8NDB2 785 aa25.68■■□□□ 1.7
TDP1-206ENST00000553569 ZNF862O60290 1169 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 IQCF3P0C7M6 154 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms