RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SETD4Q9NVD3 440 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 PCDHA10Q9Y5I2 948 aa20.88■□□□□ 0.93
PRPF40B-216ENST00000552301 NRCAMQ92823 1304 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 SLC37A4O43826 429 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 GJB2P29033 226 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 SFNP31947 248 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 JAK3P52333 1124 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 ZNF200P98182 395 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 ABHD15Q6UXT9 468 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 LMBR1Q8WVP7 490 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 WNT8AQ9H1J5 351 aa20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 FOXP1Q9H334 677 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-216ENST00000552301 TRIP12Q14669 1992 aaPredicted RBP20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 GRIK4Q16099 956 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 SWSAP1Q6NVH7 229 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 PSRC1Q6PGN9 363 aaPredicted RBP20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 MIER3Q7Z3K6 550 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 CCDC60Q8IWA6 550 aaPredicted RBP20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 ETNPPLQ8TBG4 499 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 AFAP1L1Q8TED9 768 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 GJA10Q969M2 543 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 SCLYQ96I15 445 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 IL23AQ9NPF7 189 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 DISC1Q9NRI5 854 aa20.86■□□□□ 0.93
PRPF40B-216ENST00000552301 POTEB3A0JP26 581 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 H3BQV1 296 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 TREHO43280 583 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 PSMD10O75832 226 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 BAG4O95429 457 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 ATP2B1P20020 1258 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 HOXC8P31273 242 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 IGBP1P78318 339 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 PLCB4Q15147 1175 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 POTEBQ6S5H4 581 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 SERINC5Q86VE9 423 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 RPUSD2Q8IZ73 545 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 RDM1Q8NG50 284 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 CTAGE1Q96RT6 745 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 UNC45AQ9H3U1 944 aa20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 NOL7Q9UMY1 257 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-216ENST00000552301 TANC1Q9C0D5 1861 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 IGKV6D-21A0A0A0MT36 114 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 RRN3P2A6NIE6 340 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 TBX3O15119 743 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 SELPP16109 830 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 RFC2P35250 354 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 EPHB4P54760 987 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 HIC1Q14526 733 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 DHX38Q92620 1227 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 RNPC3Q96LT9 517 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 MTIF3Q9H2K0 278 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 KCNMB3Q9NPA1 279 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 TUBE1Q9UJT0 475 aa20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 MYH9P35579 1960 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-216ENST00000552301 HBP1O60381 514 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 NEMFO60524 1076 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 PFKMP08237 780 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 IQCF3P0C7M6 154 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 ACRP10323 421 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 CKBP12277 381 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 INSRRP14616 1297 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 THPOP40225 353 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 RBL2Q08999 1139 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 SHHQ15465 462 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 CALCRLQ16602 461 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 C9orf50Q5SZB4 431 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 MCTP1Q6DN14 999 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 TAF2Q6P1X5 1199 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 NOSTRINQ8IVI9 506 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 SLFN12Q8IYM2 578 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 ATP8B4Q8TF62 1192 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 FAM167AQ96KS9 214 aa20.83■□□□□ 0.93
PRPF40B-216ENST00000552301 PARNO95453 639 aaKnown RBP20.82■□□□□ 0.92
PRPF40B-216ENST00000552301 DEFB128Q7Z7B8 93 aa20.82■□□□□ 0.92
PRPF40B-216ENST00000552301 RSPH3Q86UC2 560 aa20.82■□□□□ 0.92
PRPF40B-216ENST00000552301 IGSF9BQ9UPX0 1349 aa20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 K7ELQ4 463 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 CAND2O75155 1236 aa20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 CUL4AQ13619 759 aa20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 TRMT1LQ7Z2T5 733 aaKnown RBP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 HSCBQ8IWL3 235 aa20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 BBXQ8WY36 941 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 WNT8BQ93098 351 aa20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 FTOQ9C0B1 505 aaKnown RBP eCLIP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 MAFBQ9Y5Q3 323 aaPredicted RBP20.81■□□□□ 0.92
PRPF40B-216ENST00000552301 FGBP02675 491 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 RPLP2P05387 115 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 CTSHP09668 335 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 ACTN1P12814 892 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 MCM7P33993 719 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 TRAPPC10P48553 1259 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 ADAM17P78536 824 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 PPP2R5CQ13362 524 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms