RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 MAFAQ8NHW3 353 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 MYLIPQ8WY64 445 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 GLG1Q92896 1179 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 CTAGE1Q96RT6 745 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 UNC80Q8N2C7 3258 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 CHD7Q9P2D1 2997 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 EYSQ5T1H1 3165 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 NFASCO94856 1347 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 RSPH10B2B2RC85 870 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 CPLX1O14810 134 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 RSPH10BP0C881 870 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 CPA1P15085 419 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 IFNAR1P17181 557 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 HOXC8P31273 242 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 THPOP40225 353 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 PBX2P40425 430 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 EVCP57679 992 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 ZNF618Q5T7W0 954 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 TAF2Q6P1X5 1199 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-207ENST00000549752 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
CCDC38-207ENST00000549752 NKX2-4Q9H2Z4 354 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 RNPEPQ9H4A4 650 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 KCNH7Q9NS40 1196 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
CCDC38-207ENST00000549752 HAX1O00165 279 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 TRIM66O15016 1216 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 ATP9AO75110 1047 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 LGR5O75473 907 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 PDIA3P30101 505 aaKnown RBP11.88□□□□□ -0.51
CCDC38-207ENST00000549752 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
CCDC38-207ENST00000549752 SLC26A2P50443 739 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 SETQ01105 290 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-207ENST00000549752 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
CCDC38-207ENST00000549752 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-207ENST00000549752 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 C22orf23Q9BZE7 217 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 KDM4CQ9H3R0 1056 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 SH3GLB2Q9NR46 395 aa11.88□□□□□ -0.51
CCDC38-207ENST00000549752 CUL9Q8IWT3 2517 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 GSTTP1A0A1W2PQM5 241 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 MEIS1O00470 390 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 TREHO43280 583 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 TLL1O43897 1013 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 NBNO60934 754 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 CDKL5O76039 1030 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 CYP3A4P08684 503 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 RABGGTBP53611 331 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-207ENST00000549752 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
CCDC38-207ENST00000549752 PPFIA1Q13136 1202 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 JAKMIP3Q5VZ66 844 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC38-207ENST00000549752 LMBR1Q8WVP7 490 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 SEPT8Q92599 483 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 APBB2Q92870 758 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
CCDC38-207ENST00000549752 TTC3P53804 2025 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 DEXIO95424 95 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 AMHP03971 560 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 ANAPC15P60006 121 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
CCDC38-207ENST00000549752 ADAM17P78536 824 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 ANKRD1Q15327 319 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 NTRK3Q16288 839 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 RPAINQ86UA6 219 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PLA2G4DQ86XP0 818 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PHKBQ93100 1093 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
CCDC38-207ENST00000549752 TBC1D22BQ9NU19 505 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PDRG1Q9NUG6 133 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms