RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GOLGA8DPQ0D2H9 430 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 TBC1D8BQ0IIM8 1120 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 KNOP1Q1ED39 458 aaKnown RBP11.05□□□□□ -0.64
RAB5B-206ENST00000549505 HSP90AA4PQ58FG1 418 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 FKBP15Q5T1M5 1219 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 LRCH2Q5VUJ6 765 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 DYMQ7RTS9 669 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF280CQ8ND82 737 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 REEP2Q9BRK0 252 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 UNC45AQ9H3U1 944 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
RAB5B-206ENST00000549505 CCPG1Q9ULG6 757 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 SIP14410 1827 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 SSU72P8A0A1W2PR75 194 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 PMM2O15305 246 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
RAB5B-206ENST00000549505 NCAPH2Q6IBW4 605 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 GJA10Q969M2 543 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 FBXO28Q9NVF7 368 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 AFG3L2Q9Y4W6 797 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 MRFAP1Q9Y605 127 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 NFASCO94856 1347 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 ZMYM2Q9UBW7 1377 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 SMCHD1A6NHR9 2005 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 ARID2Q68CP9 1835 aa11.05□□□□□ -0.64
RAB5B-206ENST00000549505 MARCH6O60337 910 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 NDUFA10O95299 355 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 KCNMA1Q12791 1236 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 CATSPERGQ6ZRH7 1159 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.04□□□□□ -0.642e-7■■□□□ 13.4
RAB5B-206ENST00000549505 AGBL1Q96MI9 1066 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 PDCL3Q9H2J4 239 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 HAUS4Q9H6D7 363 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 ZNHIT6Q9NWK9 470 aaKnown RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 PJA2O43164 708 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 ZBED4O75132 1171 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 LMNB1P20700 586 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 GLIS3Q8NEA6 775 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 GPRASP2Q96D09 838 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 METTL14Q9HCE5 456 aaKnown RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 FAM53CQ9NYF3 392 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 CFBP00751 764 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 ARP10275 920 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 SCP2P22307 547 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 SFNP31947 248 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 RASSF7Q02833 373 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 MAPK7Q13164 816 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 MTF1Q14872 753 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 PGM5Q15124 567 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-206ENST00000549505 CCDC174Q6PII3 467 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 C4orf19Q8IY42 314 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 SLC17A8Q8NDX2 589 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF577Q9BSK1 485 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 RUSC1Q9BVN2 902 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 CEP72Q9P209 647 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 ASTN1O14525 1302 aa11.04□□□□□ -0.64
RAB5B-206ENST00000549505 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 IRF6O14896 467 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 GAS7O60861 476 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 COBLO75128 1261 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 NOL4O94818 638 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 P4HBP07237 508 aaKnown RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 MTIF2P46199 727 aaKnown RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 KRT83P78385 493 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF397Q8NF99 534 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 PXMP2Q9NR77 195 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 AIPL1Q9NZN9 384 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF214Q9UL59 606 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 BTNL10A8MVZ5 291 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF76P36508 570 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 HERC4Q5GLZ8 1057 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 RSRC2Q7L4I2 434 aaKnown RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 SAMD7Q7Z3H4 446 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 VSIG10LQ86VR7 867 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-206ENST00000549505 NENFQ9UMX5 172 aa11.03□□□□□ -0.64
RAB5B-206ENST00000549505 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.64
RAB5B-206ENST00000549505 EFCAB8A8MWE9 144 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 NFIBO00712 420 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 JAK3P52333 1124 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 HERVK_113P62684 666 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 AMPD2Q01433 879 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 PDXDC1Q6P996 788 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 HVCN1Q96D96 273 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 PDCD2LQ9BRP1 358 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 GANQ9H2C0 597 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms