RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ZNF568Q3ZCX4 644 aa6.46□□□□□ -1.38
CNOT2-216ENST00000548939 YOD1Q5VVQ6 348 aaPredicted RBP6.46□□□□□ -1.38
CNOT2-216ENST00000548939 LRRC47Q8N1G4 583 aaKnown RBP6.46□□□□□ -1.38
CNOT2-216ENST00000548939 SLC39A2Q9NP94 309 aa6.46□□□□□ -1.38
CNOT2-216ENST00000548939 PTPN22Q9Y2R2 807 aa6.46□□□□□ -1.38
CNOT2-216ENST00000548939 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
CNOT2-216ENST00000548939 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
CNOT2-216ENST00000548939 TAX1BP1Q86VP1 789 aa6.45□□□□□ -1.38
CNOT2-216ENST00000548939 SLC43A3Q8NBI5 491 aa6.45□□□□□ -1.38
CNOT2-216ENST00000548939 NEIL1Q96FI4 390 aaPredicted RBP6.45□□□□□ -1.38
CNOT2-216ENST00000548939 CARD11Q9BXL7 1154 aa6.45□□□□□ -1.38
CNOT2-216ENST00000548939 ZFR2Q9UPR6 939 aaKnown RBP6.45□□□□□ -1.38
CNOT2-216ENST00000548939 HS3ST3A1Q9Y663 406 aa6.45□□□□□ -1.38
CNOT2-216ENST00000548939 ASXL2Q76L83 1435 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 POLD1P28340 1107 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 DBPQ10586 325 aaPredicted RBP6.44□□□□□ -1.38
CNOT2-216ENST00000548939 PRKD1Q15139 912 aaPredicted RBP6.44□□□□□ -1.38
CNOT2-216ENST00000548939 BTBD8Q5XKL5 378 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 SH3RF2Q8TEC5 729 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 ADOQ96SZ5 270 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 GMLQ99445 158 aa6.44□□□□□ -1.38
CNOT2-216ENST00000548939 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 CUTAO60888 179 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 RAC3P60763 192 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 RAB33AQ14088 237 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 DPP8Q6V1X1 898 aaPredicted RBP6.43□□□□□ -1.38
CNOT2-216ENST00000548939 NLGN4XQ8N0W4 816 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 ZNF341Q9BYN7 854 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 TRAF6Q9Y4K3 522 aa6.43□□□□□ -1.38
CNOT2-216ENST00000548939 TCRBV5S4A2TA0A5A2 114 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 PAK1Q13153 545 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 TRIM55Q9BYV6 548 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 PCED1AQ9H1Q7 454 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 RIC8BQ9NVN3 520 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 ARHGAP28Q9P2N2 729 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 SRPK3Q9UPE1 567 aa6.42□□□□□ -1.38
CNOT2-216ENST00000548939 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.41□□□□□ -1.38
CNOT2-216ENST00000548939 AQP7O14520 342 aa6.41□□□□□ -1.38
CNOT2-216ENST00000548939 PTPN1P18031 435 aaKnown RBP6.41□□□□□ -1.38
CNOT2-216ENST00000548939 COMTP21964 271 aa6.41□□□□□ -1.38
CNOT2-216ENST00000548939 TOP3AQ13472 1001 aaPredicted RBP6.41□□□□□ -1.38
CNOT2-216ENST00000548939 GPR19Q15760 415 aa6.41□□□□□ -1.38
CNOT2-216ENST00000548939 ARHGAP36Q6ZRI8 547 aa6.41□□□□□ -1.38
CNOT2-216ENST00000548939 MTDHQ86UE4 582 aaKnown RBP6.41□□□□□ -1.38
CNOT2-216ENST00000548939 ZNF669Q96BR6 464 aaPredicted RBP6.41□□□□□ -1.38
CNOT2-216ENST00000548939 SPATA9Q9BWV2 254 aa6.41□□□□□ -1.38
CNOT2-216ENST00000548939 FAM90A27PA6NNH2 459 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 RRADP55042 308 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 KLF10Q13118 480 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 FOXE3Q13461 319 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 WDR72Q3MJ13 1102 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 ZMAT1Q5H9K5 638 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 EP400NLQ6ZTU2 488 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 MAMDC2Q7Z304 686 aaPredicted RBP6.4□□□□□ -1.38
CNOT2-216ENST00000548939 FUKQ8N0W3 1084 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 EDAQ92838 391 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 FBXW5Q969U6 566 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 OAZ3Q9UMX2 235 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
CNOT2-216ENST00000548939 RAD17O75943 681 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 CR2P20023 1033 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 AGBL4Q5VU57 503 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 RNF207Q6ZRF8 634 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 PTRH1Q86Y79 214 aaKnown RBP6.39□□□□□ -1.39
CNOT2-216ENST00000548939 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 PTPRN2Q92932 1015 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 SCYL1Q96KG9 808 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 CDC6Q99741 560 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 SLITRK6Q9H5Y7 841 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 PCDHA8Q9Y5H6 950 aa6.39□□□□□ -1.39
CNOT2-216ENST00000548939 NPIPB8E9PQR5 432 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 MAN2B1O00754 1011 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 WNT9AO14904 365 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 CDC14BO60729 498 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 PDE6AP16499 860 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 KRT15P19012 456 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 GJA4P35212 333 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 ETV4P43268 484 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
CNOT2-216ENST00000548939 USP39Q53GS9 565 aaKnown RBP6.38□□□□□ -1.39
CNOT2-216ENST00000548939 FIGNQ5HY92 759 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 OSTM1Q86WC4 334 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
CNOT2-216ENST00000548939 DPYSL5Q9BPU6 564 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 ING1Q9UK53 422 aaPredicted RBP6.38□□□□□ -1.39
CNOT2-216ENST00000548939 NR2E1Q9Y466 385 aa6.38□□□□□ -1.39
CNOT2-216ENST00000548939 TRBV23-1A0A0A0MS06 115 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 OVOL3O00110 214 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 U2SURPO15042 1029 aaKnown RBP6.37□□□□□ -1.39
CNOT2-216ENST00000548939 AMY2AP04746 511 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 PYGMP11217 842 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 AMY2BP19961 511 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 ACO1P21399 889 aaKnown RBP6.37□□□□□ -1.39
CNOT2-216ENST00000548939 PTGS1P23219 599 aa6.37□□□□□ -1.39
CNOT2-216ENST00000548939 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms