RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NELFCDQ8IXH7 590 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 DDX47Q9H0S4 455 aaKnown RBP15.04■□□□□ -0
HDAC7-228ENST00000548938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.04■□□□□ -0
HDAC7-228ENST00000548938 ROBO3Q96MS0 1386 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 BRWD3Q6RI45 1802 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 DNM1LO00429 736 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 RDXP35241 583 aaKnown RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 USP11P51784 963 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 DRP2Q13474 957 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 TRIM59Q8IWR1 403 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 SCFD2Q8WU76 684 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 UBLCP1Q8WVY7 318 aaPredicted RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.03■□□□□ -0
HDAC7-228ENST00000548938 LRRC45Q96CN5 670 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 DNAJC19Q96DA6 116 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 SEC63Q9UGP8 760 aaKnown RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 MAST2Q6P0Q8 1798 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 EDIL3O43854 480 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 IBSPP21815 317 aaPredicted RBP15.03■□□□□ -0
HDAC7-228ENST00000548938 PSMD2Q13200 908 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 TMEM119Q4V9L6 283 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 FAM26FQ5R3K3 315 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 KRT79Q5XKE5 535 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 GANQ9H2C0 597 aa15.03■□□□□ -0
HDAC7-228ENST00000548938 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 SSBP05455 408 aaKnown RBP eCLIP15.02■□□□□ -0
HDAC7-228ENST00000548938 PTK2Q05397 1052 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 BYSLQ13895 437 aaKnown RBP15.02■□□□□ -0
HDAC7-228ENST00000548938 ODF2Q5BJF6 829 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 EIF1ADQ8N9N8 165 aaKnown RBP15.02■□□□□ -0
HDAC7-228ENST00000548938 GJA10Q969M2 543 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 UBA5Q9GZZ9 404 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 ACTR5Q9H9F9 607 aaPredicted RBP15.02■□□□□ -0
HDAC7-228ENST00000548938 LRRC4CQ9HCJ2 640 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 HAUS2Q9NVX0 235 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 AIPL1Q9NZN9 384 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 LEMD3Q9Y2U8 911 aa15.02■□□□□ -0
HDAC7-228ENST00000548938 NOC2LQ9Y3T9 749 aaKnown RBP15.02■□□□□ -0
HDAC7-228ENST00000548938 GYS1P13807 737 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 CDR1P51861 262 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 PPP2R2AP63151 447 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 BIRC3Q13489 604 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 DIXDC1Q155Q3 683 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 PREPLQ4J6C6 727 aaPredicted RBP15.02□□□□□ -0.01
HDAC7-228ENST00000548938 ANKRD20A8PQ5CZ79 823 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 TGFBRAP1Q8WUH2 860 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 SEC16BQ96JE7 1060 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 NOVA2Q9UNW9 492 aaKnown RBP15.02□□□□□ -0.01
HDAC7-228ENST00000548938 MYH4Q9Y623 1939 aa15.02□□□□□ -0.01
HDAC7-228ENST00000548938 PGRMC1O00264 195 aaKnown RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 CES2O00748 559 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 DAPK3O43293 454 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 PDHBP11177 359 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ACTN1P12814 892 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ITGA4P13612 1032 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ORC2Q13416 577 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 FOXR2Q6PJQ5 311 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 RUFY4Q6ZNE9 571 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ZNF571Q7Z3V5 609 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 LRRC57Q8N9N7 239 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 CNBD1Q8NA66 436 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ACTRT1Q8TDG2 376 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 RAPGEF5Q92565 580 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 PANK4Q9NVE7 773 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 MCM8Q9UJA3 840 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 BHMG1C9JSJ3 638 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ATP2C2O75185 946 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 MAPKAPK5Q8IW41 473 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 FUKQ8N0W3 1084 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 METTL13Q8N6R0 699 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 CEP63Q96MT8 703 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 RAB34Q9BZG1 259 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 SNED1Q8TER0 1413 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 ZBTB48P10074 688 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 MAGOHP61326 146 aaKnown RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 NEDD9Q14511 834 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 C3orf20Q8ND61 904 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 GIMAP7Q8NHV1 300 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
HDAC7-228ENST00000548938 COA7Q96BR5 231 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 PBKQ96KB5 322 aa15.01□□□□□ -0.01
HDAC7-228ENST00000548938 BTNL10A8MVZ5 291 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 KRIT1O00522 736 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 EPS15P42566 896 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 SNCBQ16143 134 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 TMC3Q7Z5M5 1100 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 FAM228AQ86W67 206 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 PARP9Q8IXQ6 854 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 CACNA2D3Q8IZS8 1091 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
HDAC7-228ENST00000548938 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.018e-7■■■■■ 32.7
HDAC7-228ENST00000548938 C5orf60A6NFR6 353 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 TMCO5BA8MYB1 307 aa15□□□□□ -0.01
HDAC7-228ENST00000548938 PAEPP09466 180 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms