RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ZDHHC9Q9Y397 364 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 HS3ST3A1Q9Y663 406 aa5.85□□□□□ -1.47
SCAF11-210ENST00000547654 TTBK1Q5TCY1 1321 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-210ENST00000547654 PDPK1O15530 556 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 DGKIO75912 1065 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 NFATC3Q12968 1075 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 HSP90AA2PQ14568 343 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-210ENST00000547654 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 CCDC181Q5TID7 509 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 STYK1Q6J9G0 422 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 KCNT2Q6UVM3 1135 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 RALYLQ86SE5 291 aaKnown RBP5.84□□□□□ -1.47
SCAF11-210ENST00000547654 PTPN18Q99952 460 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 SPATA9Q9BWV2 254 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 MEGF9Q9H1U4 602 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 EPB41L1Q9H4G0 881 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 SPC25Q9HBM1 224 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 CLDND1Q9NY35 253 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 MYOTQ9UBF9 498 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 PRKAB1Q9Y478 270 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 PCDHA2Q9Y5H9 948 aa5.84□□□□□ -1.47
SCAF11-210ENST00000547654 WNT9AO14904 365 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 PRODHO43272 600 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 MAFKO60675 156 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 ZNF623O75123 536 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 CDC45O75419 566 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 KCNJ6P48051 423 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 KLF10Q13118 480 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 R3HDM1Q15032 1099 aaKnown RBP5.83□□□□□ -1.48
SCAF11-210ENST00000547654 LBX2Q6XYB7 198 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 LRP10Q7Z4F1 713 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 DEPDC7Q96QD5 511 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 IFT57Q9NWB7 429 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 SNTG2Q9NY99 539 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 TELO2Q9Y4R8 837 aa5.83□□□□□ -1.48
SCAF11-210ENST00000547654 BLACEA4D250 179 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 CCDC85CA6NKD9 419 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 LRG1P02750 347 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 PHOSPHO1Q8TCT1 267 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 DCAF4Q8WV16 495 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 EXOC2Q96KP1 924 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 RNPC3Q96LT9 517 aaKnown RBP5.82□□□□□ -1.48
SCAF11-210ENST00000547654 PHF20Q9BVI0 1012 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 PCDH12Q9NPG4 1184 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 ABCC9O60706 1549 aa5.82□□□□□ -1.48
SCAF11-210ENST00000547654 TCRBV5S4A2TA0A5A2 114 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 FAM153BP0C7A2 387 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 PLEKHG4Q58EX7 1191 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 HSP90AB2PQ58FF8 381 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 VASNQ6EMK4 673 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 IFNL2Q8IZJ0 200 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 ZBTB38Q8NAP3 1195 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-210ENST00000547654 SH3RF2Q8TEC5 729 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 WWC2-AS2Q96NR7 200 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 ZFYVE21Q9BQ24 234 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 TESMINQ9Y4I5 508 aa5.81□□□□□ -1.48
SCAF11-210ENST00000547654 TRAV20A0A0B4J274 112 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 IQCA1LA6NCM1 817 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 KRIT1O00522 736 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 COL6A1P12109 1028 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 GPR85P60893 370 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 IFRD2Q12894 506 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-210ENST00000547654 CYP4F22Q6NT55 531 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 LRRC47Q8N1G4 583 aaKnown RBP5.8□□□□□ -1.48
SCAF11-210ENST00000547654 NUDT10Q8NFP7 164 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 TTLL11Q8NHH1 800 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 Q8TCH9 128 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 CLEC4DQ8WXI8 215 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 APPBP2Q92624 585 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 NUDT11Q96G61 164 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 PSMD1Q99460 953 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 JAM3Q9BX67 310 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 SLC6A20Q9NP91 592 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 ASH2LQ9UBL3 628 aa5.8□□□□□ -1.48
SCAF11-210ENST00000547654 ING1Q9UK53 422 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-210ENST00000547654 AGRPO00253 132 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 FBXO21O94952 628 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 S100BP04271 92 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-210ENST00000547654 EPHA5P54756 1037 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 PRKD1Q15139 912 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-210ENST00000547654 LONRF2Q1L5Z9 754 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 FAM209AQ5JX71 171 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 USP53Q70EK8 1073 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 OTOP3Q7RTS5 596 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 HOMER1Q86YM7 354 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 CERS3Q8IU89 383 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 TRIM48Q8IWZ4 208 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 DHX37Q8IY37 1157 aaKnown RBP5.79□□□□□ -1.48
SCAF11-210ENST00000547654 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
SCAF11-210ENST00000547654 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.79□□□□□ -1.488e-6■□□□□ 10.5
SCAF11-210ENST00000547654 SH3TC2Q8TF17 1288 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 LRRC37BQ96QE4 947 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 LMF1Q96S06 567 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 SMOC1Q9H4F8 434 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 DLL4Q9NR61 685 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 FANCLQ9NW38 375 aa5.79□□□□□ -1.48
SCAF11-210ENST00000547654 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms