RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 DNERQ8NFT8 737 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 SH3RF3Q8TEJ3 882 aaPredicted RBP5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 AJUBAQ96IF1 538 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 NBPF4Q96M43 638 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 CDK5RAP1Q96SZ6 601 aaKnown RBP5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 KLC2Q9H0B6 622 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 SLC39A2Q9NP94 309 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 RIC8BQ9NVN3 520 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 TSC22D4Q9Y3Q8 395 aa5.11□□□□□ -1.59
RAB3IP-209ENST00000547055 DIAPH1O60610 1272 aaKnown RBP5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 CNOT4O95628 575 aaKnown RBP5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 PYGMP11217 842 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 PTPN1P18031 435 aaKnown RBP5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 NAT1P18440 290 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 KRT15P19012 456 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 CSF2RBP32927 897 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 ST5P78524 1137 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 DBPQ10586 325 aaPredicted RBP5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 REXO1L1PQ8IX06 675 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 PCDH19Q8TAB3 1148 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 KATNBL1Q9H079 304 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 MEGF9Q9H1U4 602 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 SIRPGQ9P1W8 387 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 ARHGAP28Q9P2N2 729 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 SRPK3Q9UPE1 567 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 SLC4A7Q9Y6M7 1214 aa5.1□□□□□ -1.59
RAB3IP-209ENST00000547055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 ESYT3A0FGR9 886 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 FAM90A27PA6NNH2 459 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 PATE3B3GLJ2 98 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 ARVCFO00192 962 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 WNT9AO14904 365 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 SUV39H1O43463 412 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 C6orf222P0C671 652 aaPredicted RBP5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 FAM153BP0C7A2 387 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 PDE6AP16499 860 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 GABREP78334 506 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 CDSNQ15517 529 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 ZNF568Q3ZCX4 644 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 DPP8Q6V1X1 898 aaPredicted RBP5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 C16orf59Q7L2K0 433 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 SPRED1Q7Z699 444 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 OSTM1Q86WC4 334 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 PTRH1Q86Y79 214 aaKnown RBP5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 PALM2Q8IXS6 379 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 LMF1Q96S06 567 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 SEC61A2Q9H9S3 476 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 CBLCQ9ULV8 474 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 TCAF1Q9Y4C2 921 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 ATP23Q9Y6H3 246 aa5.09□□□□□ -1.59
RAB3IP-209ENST00000547055 KDM2BQ8NHM5 1336 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 MAN2B1O00754 1011 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 GSTA4O15217 222 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 ZNF623O75123 536 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 AMY2AP04746 511 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 ZNF888P0CJ79 500 aaPredicted RBP5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 AMY2BP19961 511 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 POLD1P28340 1107 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 GJA4P35212 333 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 GTF2F1P35269 517 aaKnown RBP eCLIP5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 SELENOPP49908 381 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 USP10Q14694 798 aaKnown RBP5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 CRY1Q16526 586 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 FAM47CQ5HY64 1035 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 FIGNQ5HY92 759 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 ZC3H7AQ8IWR0 971 aaKnown RBP5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 GNRHR2Q96P88 292 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 LRRC37BQ96QE4 947 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 DHRS4Q9BTZ2 278 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 CARD11Q9BXL7 1154 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 PTPN22Q9Y2R2 807 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 PCDHA9Q9Y5H5 950 aa5.08□□□□□ -1.6
RAB3IP-209ENST00000547055 AKAP8O43823 692 aaKnown RBP5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 CUTAO60888 179 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 CRTAMO95727 393 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 DNM2P50570 870 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 JAM2P57087 298 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 GIMAP8Q8ND71 665 aaPredicted RBP5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 Q8TCH9 128 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 WWC2-AS2Q96NR7 200 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 HIRIP3Q9BW71 556 aaPredicted RBP5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 MRPS23Q9Y3D9 190 aaKnown RBP5.07□□□□□ -1.6
RAB3IP-209ENST00000547055 CCDC66A2RUB6 948 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 PRAMEF25A6NGN4 478 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 ZNF561-AS1K7EIQ3 104 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 KCNK3O14649 394 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 MUSKO15146 869 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 FSHBP01225 129 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 APPP05067 770 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 C6P13671 934 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 PTGS1P23219 599 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 LONRF2Q1L5Z9 754 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 WDR72Q3MJ13 1102 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 HS1BP3Q53T59 392 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 TCTN3Q6NUS6 607 aa5.06□□□□□ -1.6
RAB3IP-209ENST00000547055 TAX1BP1Q86VP1 789 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms