RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 VAV3Q9UKW4 847 aa18.95■□□□□ 0.62
CCDC38-203ENST00000546803 PCDHA12Q9UN75 941 aa18.95■□□□□ 0.62
CCDC38-203ENST00000546803 NOD1Q9Y239 953 aa18.95■□□□□ 0.62
CCDC38-203ENST00000546803 NRCAMQ92823 1304 aa18.95■□□□□ 0.62
CCDC38-203ENST00000546803 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 C17orf102A2RUQ5 167 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 STX6O43752 255 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 MARK3P27448 753 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 GDF6Q6KF10 455 aaPredicted RBP18.94■□□□□ 0.62
CCDC38-203ENST00000546803 SH3RF1Q7Z6J0 888 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 PPP1R13LQ8WUF5 828 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 GABBR1Q9UBS5 961 aa18.94■□□□□ 0.62
CCDC38-203ENST00000546803 MAFBQ9Y5Q3 323 aaPredicted RBP18.94■□□□□ 0.62
CCDC38-203ENST00000546803 TRIM43BA6NCK2 446 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 RAG1P15918 1043 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 SYN1P17600 705 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 PRPF38BQ5VTL8 546 aaKnown RBP18.93■□□□□ 0.62
CCDC38-203ENST00000546803 ATP8B4Q8TF62 1192 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 TRIM43Q96BQ3 446 aaPredicted RBP18.93■□□□□ 0.62
CCDC38-203ENST00000546803 LBHD1Q9BQE6 289 aaPredicted RBP18.93■□□□□ 0.62
CCDC38-203ENST00000546803 TMEM60Q9H2L4 133 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 TTC12Q9H892 705 aaPredicted RBP18.93■□□□□ 0.62
CCDC38-203ENST00000546803 TRPC6Q9Y210 931 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 MTMR6Q9Y217 621 aa18.93■□□□□ 0.62
CCDC38-203ENST00000546803 SCN10AQ9Y5Y9 1956 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 POTEB3A0JP26 581 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 RRN3P2A6NIE6 340 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 LAD1O00515 517 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 HBP1O60381 514 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 OR52Z1P0C646 297 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 TXKP42681 527 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 PPFIA1Q13136 1202 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 EPHA7Q15375 998 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 CKAP2LQ8IYA6 745 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 ATP6V0A1Q93050 837 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 FAM167AQ96KS9 214 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 HIPK3Q9H422 1215 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.92■□□□□ 0.62
CCDC38-203ENST00000546803 SETD4Q9NVD3 440 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 PCDHB6Q9Y5E3 794 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 IGSF9BQ9UPX0 1349 aa18.92■□□□□ 0.62
CCDC38-203ENST00000546803 EML1O00423 815 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 DKC1O60832 514 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC38-203ENST00000546803 TIMP1P01033 207 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 INSRRP14616 1297 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 SPIRE1Q08AE8 756 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 PTK7Q13308 1070 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 BFSP2Q13515 415 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 NBR1Q14596 966 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 GRIK4Q16099 956 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 FERMT3Q86UX7 667 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 C4orf32Q8N8J7 132 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 LMBR1Q8WVP7 490 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-203ENST00000546803 CTAGE1Q96RT6 745 aa18.91■□□□□ 0.62
CCDC38-203ENST00000546803 NOC4LQ9BVI4 516 aaKnown RBP18.91■□□□□ 0.62
CCDC38-203ENST00000546803 ZSCAN16Q9H4T2 348 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-203ENST00000546803 P4HBP07237 508 aaKnown RBP18.9■□□□□ 0.62
CCDC38-203ENST00000546803 CYP2C9P11712 490 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 ATP4AP20648 1035 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 PSMC5P62195 406 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 ADAM17P78536 824 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 RESTQ13127 1097 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 PTGDRQ13258 359 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 HIC1Q14526 733 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 NCAPH2Q6IBW4 605 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 SERINC5Q86VE9 423 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 CAGE1Q8TC20 777 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 NRBP2Q9NSY0 501 aa18.9■□□□□ 0.62
CCDC38-203ENST00000546803 MBLAC1A4D2B0 266 aaPredicted RBP18.89■□□□□ 0.61
CCDC38-203ENST00000546803 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 BMP15O95972 392 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 PRPHP41219 470 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
CCDC38-203ENST00000546803 ZNF200P98182 395 aaPredicted RBP18.89■□□□□ 0.61
CCDC38-203ENST00000546803 RBL2Q08999 1139 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 TMEM266Q2M3C6 531 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 ZNF484Q5JVG2 852 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 CEP131Q9UPN4 1083 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 COL1A2P08123 1366 aa18.89■□□□□ 0.61
CCDC38-203ENST00000546803 TREHO43280 583 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 ZNF862O60290 1169 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 OATP04181 439 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 RPLP2P05387 115 aaKnown RBP18.88■□□□□ 0.61
CCDC38-203ENST00000546803 ITGB8P26012 769 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 MAGEA10P43363 369 aaPredicted RBP18.88■□□□□ 0.61
CCDC38-203ENST00000546803 FXR2P51116 673 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC38-203ENST00000546803 PRKCEQ02156 737 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 XKR3Q5GH77 459 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 TAF2Q6P1X5 1199 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 BADQ92934 168 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 PPP1R12CQ9BZL4 782 aa18.88■□□□□ 0.61
CCDC38-203ENST00000546803 TUBE1Q9UJT0 475 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms