RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 SP100P23497 879 aaPredicted RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 CD52P31358 61 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 NBL1P41271 181 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 SP4Q02446 784 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 TSHZ1Q6ZSZ6 1077 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 TMEM105Q8N8V8 129 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 ZBTB10Q96DT7 871 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 INPP4AQ96PE3 977 aaPredicted RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 RNF41Q9H4P4 317 aaPredicted RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 TLE6Q9H808 572 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 PCDHA1Q9Y5I3 950 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 CDY2AQ9Y6F7 541 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 MYH6P13533 1939 aa10.9□□□□□ -0.67
CHD4-212ENST00000545083 NCOR2Q9Y618 2525 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 B4E1Z4 1266 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 ZBTB5O15062 677 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 NUBP1P53384 320 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 NEDD9Q14511 834 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 MARCH8Q5T0T0 291 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 ERMP1Q7Z2K6 904 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 NPAS4Q8IUM7 802 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
CHD4-212ENST00000545083 S1PR5Q9H228 398 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 SMOC2Q9H3U7 446 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 CDH22Q9UJ99 828 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 RCAN3Q9UKA8 241 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
CHD4-212ENST00000545083 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 ZNF292O60281 2723 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 DOCK5Q9H7D0 1870 aa10.89□□□□□ -0.67
CHD4-212ENST00000545083 DNAH14Q0VDD8 3507 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
CHD4-212ENST00000545083 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 ID4P47928 161 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 ERVFC1P60507 584 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 MRPS6P82932 125 aaKnown RBP10.88□□□□□ -0.67
CHD4-212ENST00000545083 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 KCNC3Q14003 757 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 GNPTABQ3T906 1256 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 CCDC178Q5BJE1 867 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 SYCE2Q6PIF2 218 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 FRMD5Q7Z6J6 570 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 IQCA1Q86XH1 822 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 KREMEN2Q8NCW0 462 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 MICAL1Q8TDZ2 1067 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 APOL5Q9BWW9 433 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 PLXNA4Q9HCM2 1894 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 ZSWIM5Q9P217 1185 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 MAD2L2Q9UI95 211 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 TUBE1Q9UJT0 475 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 EPG5Q9HCE0 2579 aa10.88□□□□□ -0.67
CHD4-212ENST00000545083 MBLAC1A4D2B0 266 aaPredicted RBP10.87□□□□□ -0.67
CHD4-212ENST00000545083 ZNF213O14771 459 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 FIBPO43427 364 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 BRD1O95696 1058 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 ARP10275 920 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 MARK3P27448 753 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 TCF7P36402 384 aaPredicted RBP10.87□□□□□ -0.67
CHD4-212ENST00000545083 GRIK4Q16099 956 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 DUSP6Q16828 381 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 ZBTB33Q86T24 672 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 HOMER1Q86YM7 354 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 NEK1Q96PY6 1258 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 PIGSQ96S52 555 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
CHD4-212ENST00000545083 FSCN2O14926 492 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 SCG2P13521 617 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
CHD4-212ENST00000545083 TECP42680 631 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 PDE1AP54750 535 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 IGBP1P78318 339 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 TMEM184AQ6ZMB5 413 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 RSPH3Q86UC2 560 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 FTHL17Q9BXU8 183 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
CHD4-212ENST00000545083 TMX1Q9H3N1 280 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 PADI3Q9ULW8 664 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 DMXL1Q9Y485 3027 aa10.86□□□□□ -0.67
CHD4-212ENST00000545083 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
CHD4-212ENST00000545083 GSTTP1A0A1W2PQM5 241 aa10.85□□□□□ -0.67
CHD4-212ENST00000545083 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
CHD4-212ENST00000545083 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms