RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 C1orf53Q5VUE5 145 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 CABP7Q86V35 215 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 IQUBQ8NA54 791 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 GPT2Q8TD30 523 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 ZNF576Q9H609 170 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 MAGEF1Q9HAY2 307 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 FLRT1Q9NZU1 646 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 HPSEQ9Y251 543 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 MRVI1Q9Y6F6 885 aa10.68□□□□□ -0.7
YBX3-215ENST00000544504 ZNFX1Q9P2E3 1918 aaKnown RBP10.68□□□□□ -0.7
YBX3-215ENST00000544504 REV3LO60673 3130 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 A0A1B0GVL5 298 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 TRIM43BA6NCK2 446 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 DKC1O60832 514 aaKnown RBP eCLIP10.67□□□□□ -0.7
YBX3-215ENST00000544504 COBLO75128 1261 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 PSMD10O75832 226 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 ARP10275 920 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 NDUFA8P51970 172 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 JAK3P52333 1124 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 GJC2Q5T442 439 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 CCDC183Q5T5S1 534 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 OLFML2BQ68BL8 750 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 ARMCX2Q7L311 632 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 SMAP1Q8IYB5 467 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 ELOA2Q8IYF1 753 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 CEP57L1Q8IYX8 460 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 FMR1NBQ8N0W7 255 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 ENGASEQ8NFI3 743 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 SCFD2Q8WU76 684 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 TRIM43Q96BQ3 446 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 MAML3Q96JK9 1138 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
YBX3-215ENST00000544504 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 DACT1Q9NYF0 836 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 NRBP1Q9UHY1 535 aa10.67□□□□□ -0.7
YBX3-215ENST00000544504 LCTP09848 1927 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 ASTN1O14525 1302 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 NR1I2O75469 434 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 ZNF202O95125 648 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 LIG1P18858 919 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 GRIN1Q05586 938 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 TTLL4Q14679 1199 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 EPHA7Q15375 998 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 IL17AQ16552 155 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 RRAGBQ5VZM2 374 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 MIER3Q7Z3K6 550 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 SNX29Q8TEQ0 813 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 PPM1EQ8WY54 764 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 FGD4Q96M96 766 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 LRRC27Q9C0I9 530 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 NUP62CLQ9H1M0 184 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
YBX3-215ENST00000544504 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 HCN4Q9Y3Q4 1203 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
YBX3-215ENST00000544504 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 POTEMA6NI47 508 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 WDR64B1ANS9 1081 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 NKRFO15226 690 aaKnown RBP eCLIP10.65□□□□□ -0.7
YBX3-215ENST00000544504 POLR2DO15514 142 aaKnown RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 MYL1P05976 194 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 SLFN14P0C7P3 912 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 CYBAP13498 195 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 KCNA2P16389 499 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 RPA1P27694 616 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 CYP2C19P33261 490 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 CCT6AP40227 531 aaKnown RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 STAT6P42226 847 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 EPHB4P54760 987 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 AMPD3Q01432 767 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 SPIRE1Q08AE8 756 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 SNW1Q13573 536 aaKnown RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 SPECC1Q5M775 1068 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 HYIQ5T013 277 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 NCAPH2Q6IBW4 605 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 CAVIN1Q6NZI2 390 aaKnown RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 CNNM3Q8NE01 707 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 TRPV1Q8NER1 839 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 EPSTI1Q96J88 318 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 TNMDQ9H2S6 317 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 GOLPH3LQ9H4A5 285 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 CLSTN2Q9H4D0 955 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.7
YBX3-215ENST00000544504 DISC1Q9NRI5 854 aa10.65□□□□□ -0.7
YBX3-215ENST00000544504 SLC9A2Q9UBY0 812 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms