RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 BBS9Q3SYG4 887 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 OR9Q1Q8NGQ5 310 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 GSDMAQ96QA5 445 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 FRMD3A2A2Y4 597 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 SYNDIG1LA6NDD5 238 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 SYCE1LA8MT33 242 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 ATICP31939 592 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 DDIT3P35638 169 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 WASHC5Q12768 1159 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 KRT39Q6A163 491 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 KLHL29Q96CT2 875 aa11.54□□□□□ -0.56
GABRB3-204ENST00000541819 NAF1Q96HR8 494 aaKnown RBP11.54□□□□□ -0.56
GABRB3-204ENST00000541819 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
GABRB3-204ENST00000541819 ESRRAP11474 423 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PSMA2P25787 234 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TMED1Q13445 227 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LBRQ14739 615 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CDC37Q16543 378 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LRRC31Q6UY01 552 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 EEPD1Q7L9B9 569 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 FAM160B2Q86V87 743 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CRLF3Q8IUI8 442 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SLC26A7Q8TE54 656 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PYROXD1Q8WU10 500 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ULK4Q96C45 1275 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 RMDN2Q96LZ7 410 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TBK1Q9UHD2 729 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PHLPP2Q6ZVD8 1323 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 MXI1P50539 228 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SEPT2Q15019 361 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CDO1Q16878 200 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ERICH1Q86X53 443 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LRRC8AQ8IWT6 810 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 FAM133AQ8N9E0 248 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CLIC4Q9Y696 253 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SEC24BO95487 1268 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SKIP12755 728 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 UBE3CQ15386 1083 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 TRIP13Q15645 432 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 CATSPER4Q7RTX7 472 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SH3KBP1Q96B97 665 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PIDD1Q9HB75 910 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PARVGQ9HBI0 331 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LMBRD1Q9NUN5 540 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LCMT1Q9UIC8 334 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PPP6R2O75170 966 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 NDUFA8P51970 172 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 OCA2Q04671 838 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 FAM133BQ5BKY9 247 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ZNF658Q5TYW1 1059 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 MAGEB5Q9BZ81 275 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 MYO1DO94832 1006 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 KCNA4P22459 653 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LRRC41Q15345 812 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 RC3H1Q5TC82 1133 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 PDIK1LQ8N165 341 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
GABRB3-204ENST00000541819 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
GABRB3-204ENST00000541819 A0A0D9SFI3 127 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 WDR91A4D1P6 747 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 KPNA7A9QM74 516 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 ZMYM3Q14202 1370 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 FSCBQ5H9T9 825 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 ACAD11Q709F0 780 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 STX19Q8N4C7 294 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.56
GABRB3-204ENST00000541819 MRFAP1L1Q96HT8 127 aa11.52□□□□□ -0.56
GABRB3-204ENST00000541819 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.56
GABRB3-204ENST00000541819 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.57
GABRB3-204ENST00000541819 CCDC151A5D8V7 595 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 MEIS1O00470 390 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 MYL1P05976 194 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 MARK3P27448 753 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 ST13P4Q8IZP2 240 aaPredicted RBP11.52□□□□□ -0.57
GABRB3-204ENST00000541819 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 DACH2Q96NX9 599 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 CENPKQ9BS16 269 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 CDC23Q9UJX2 597 aa11.52□□□□□ -0.57
GABRB3-204ENST00000541819 SNX5Q9Y5X3 404 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms