RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 FOXN1O15353 648 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 HAUS5O94927 633 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 PAX3P23760 479 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 NOP14P78316 857 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 NT5C3AQ9H0P0 336 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 MRPL46Q9H2W6 279 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 STK10O94804 968 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 STMN1P16949 149 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 MARK3P27448 753 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 DR1Q01658 176 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 GCKRQ14397 625 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 NR1I3Q14994 352 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 SV2BQ7L1I2 683 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 ERICH1Q86X53 443 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 SRRM1Q8IYB3 904 aaKnown RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 TMEM87BQ96K49 555 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 PMS2P54278 862 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 RGS9BPQ6ZS82 235 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 ENGASEQ8NFI3 743 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 FERMT1Q9BQL6 677 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
ERBB2-204ENST00000541774 RWDD2AQ9UIY3 292 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
ERBB2-204ENST00000541774 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 MAN1A2O60476 641 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 CASP1P29466 404 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 FMR1Q06787 632 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERBB2-204ENST00000541774 RCN1Q15293 331 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 P3H1Q32P28 736 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 MPP4Q96JB8 637 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 CAPN9O14815 690 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 CALML3P27482 149 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ITIH3Q06033 890 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 TBL3Q12788 808 aaKnown RBP11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ITIH4Q14624 930 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ANO5Q75V66 913 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ICA1LQ8NDH6 482 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 PI4K2BQ8TCG2 481 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 EPAS1Q99814 870 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ZWINTO95229 277 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 CNBD1Q8NA66 436 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 MAGEC3Q8TD91 643 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 PHACTR1Q9C0D0 580 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 ZNF148Q9UQR1 794 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
ERBB2-204ENST00000541774 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
ERBB2-204ENST00000541774 HNRNPRO43390 633 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 ZMYM1Q5SVZ6 1142 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 IRGCQ6NXR0 463 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 SIX5Q8N196 739 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 ESR2Q92731 530 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 LRGUKQ96M69 825 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 DCLRE1BQ9H816 532 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 WDR17Q8IZU2 1322 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 E7ENQ6 273 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 GFAPP14136 432 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 SPARCL1Q14515 664 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 PANK4Q9NVE7 773 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 DDX18Q9NVP1 670 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 NDUFA13Q9P0J0 144 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 DPPA5A6NC42 116 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 GIPC1O14908 333 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 VCAM1P19320 739 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 PGM1P36871 562 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 BLMHQ13867 455 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 RABGAP1LQ5R372 815 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 KRT79Q5XKE5 535 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 DYMQ7RTS9 669 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
ERBB2-204ENST00000541774 PYGBP11216 843 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 HSD17B3P37058 310 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 CBX3Q13185 183 aa11.87□□□□□ -0.51
ERBB2-204ENST00000541774 DDX42Q86XP3 938 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms