RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 POF1BQ8WVV4 589 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 PRRX2Q99811 253 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 AGO3Q9H9G7 860 aaKnown RBP13.68□□□□□ -0.22
COPA-205ENST00000541366 MAD2L2Q9UI95 211 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
COPA-205ENST00000541366 SPATA31C2B4DYI2 1134 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
COPA-205ENST00000541366 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 CD52P31358 61 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 PKN1Q16512 942 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 METTL7BQ6UX53 244 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 DNAJB3Q8WWF6 145 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 P2RX5Q93086 422 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
COPA-205ENST00000541366 PIGSQ96S52 555 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
COPA-205ENST00000541366 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
COPA-205ENST00000541366 IBSPP21815 317 aaPredicted RBP13.66□□□□□ -0.22
COPA-205ENST00000541366 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
COPA-205ENST00000541366 ICAM3P32942 547 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 NEDD9Q14511 834 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 RILPL2Q969X0 211 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 MAP3K20Q9NYL2 800 aaKnown RBP13.66□□□□□ -0.22
COPA-205ENST00000541366 ZNF215Q9UL58 517 aaPredicted RBP13.66□□□□□ -0.22
COPA-205ENST00000541366 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
COPA-205ENST00000541366 NRCAMQ92823 1304 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 MYO10Q9HD67 2058 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 MARK3P27448 753 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 GNPTABQ3T906 1256 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 MARCH8Q5T0T0 291 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 ASCL5Q7RTU5 278 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
COPA-205ENST00000541366 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 APOL5Q9BWW9 433 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 TLE6Q9H808 572 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
COPA-205ENST00000541366 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
COPA-205ENST00000541366 FIBPO43427 364 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 CYTH3O43739 400 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
COPA-205ENST00000541366 IGBP1P78318 339 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 GRIK4Q16099 956 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 IFIT1BQ5T764 474 aaKnown RBP13.64□□□□□ -0.23
COPA-205ENST00000541366 TAF2Q6P1X5 1199 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 SUSD6Q92537 303 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 FAM49AQ9H0Q0 323 aaPredicted RBP13.64□□□□□ -0.23
COPA-205ENST00000541366 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
COPA-205ENST00000541366 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 ATP9AO75110 1047 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 SDSP20132 328 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 ERVFC1P60507 584 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
COPA-205ENST00000541366 SEC23AQ15436 765 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 CYB5R4Q7L1T6 521 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 NPAS4Q8IUM7 802 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 SENP2Q9HC62 589 aa13.63□□□□□ -0.23
COPA-205ENST00000541366 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
COPA-205ENST00000541366 CACNA1AO00555 2505 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
COPA-205ENST00000541366 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 PADI3Q9ULW8 664 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 GVINP1Q7Z2Y8 2422 aa13.62□□□□□ -0.23
COPA-205ENST00000541366 PNMA6FA0A0J9YX94 578 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 MBLAC1A4D2B0 266 aaPredicted RBP13.61□□□□□ -0.23
COPA-205ENST00000541366 PRR23AA6NEV1 266 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
COPA-205ENST00000541366 SCG2P13521 617 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 ATF7P17544 494 aaPredicted RBP13.61□□□□□ -0.23
COPA-205ENST00000541366 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
COPA-205ENST00000541366 APOBRQ0VD83 1088 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 DUSP6Q16828 381 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 TRAPPC12Q8WVT3 735 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 RIPOR3Q96MK2 946 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 KRT23Q9C075 422 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms