RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 TRIM37O94972 964 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 ACTN1P12814 892 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 GCFC2P16383 781 aaKnown RBP10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 SLC9C1Q4G0N8 1177 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 KCTD1Q719H9 257 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 ZNF571Q7Z3V5 609 aaPredicted RBP10.5□□□□□ -0.73
CNOT4-212ENST00000541284 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 TBC1D22AQ8WUA7 517 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 CUL5Q93034 780 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 TSG101Q99816 390 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 RAB34Q9BZG1 259 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 LRRC27Q9C0I9 530 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 RSPH14Q9UHP6 348 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 DOCK5Q9H7D0 1870 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
CNOT4-212ENST00000541284 CLSTN1O94985 981 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 CPP00450 1065 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 PPFIA1Q13136 1202 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 GIT2Q14161 759 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 ALS2CLQ60I27 953 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 DNAAF5Q86Y56 855 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
CNOT4-212ENST00000541284 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 GOLGA8KD6RF30 607 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 MAGEA9P43362 315 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 C8orf74Q6P047 294 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 POTEGQ6S5H5 508 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CACNA2D4Q7Z3S7 1137 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CD302Q8IX05 232 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 FAM133AQ8N9E0 248 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 DHX36Q9H2U1 1008 aaKnown RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 RNF14Q9UBS8 474 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 TRAF3IP3Q9Y228 551 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 OPLAHO14841 1288 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 SLC26A4O43511 780 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 JAM2P57087 298 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 GTF2IP78347 998 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 PTK2Q05397 1052 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 NFIAQ12857 509 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 APOBEC3HQ6NTF7 200 aaKnown RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 GPBP1Q86WP2 473 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 RPGRQ92834 1020 aaKnown RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 BORCS6Q96GS4 357 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 COA1Q9GZY4 146 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 PLCB1Q9NQ66 1216 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 NFU1Q9UMS0 254 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 PPEF1O14829 653 aaPredicted RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 NPR1P16066 1061 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 SLC9A1P19634 815 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CFAP221Q4G0U5 840 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CCDC40Q4G0X9 1142 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 ZNF772Q68DY9 489 aaPredicted RBP10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CDC42EP5Q6NZY7 148 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 CATSPER3Q86XQ3 398 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 SH2D3CQ8N5H7 860 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 USP38Q8NB14 1042 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 SCFD2Q8WU76 684 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 NT5C3AQ9H0P0 336 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 PSTPIP2Q9H939 334 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 ADAMTS1Q9UHI8 967 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 STXBP5LQ9Y2K9 1186 aa10.49□□□□□ -0.73
CNOT4-212ENST00000541284 ASTN1O14525 1302 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 CES2O00748 559 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 HEXIM1O94992 359 aaKnown RBP10.48□□□□□ -0.73
CNOT4-212ENST00000541284 GNA14O95837 355 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 KRT14P02533 472 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 EPHA7Q15375 998 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 CDC37Q16543 378 aaPredicted RBP10.48□□□□□ -0.73
CNOT4-212ENST00000541284 TDRD12Q587J7 1177 aaKnown RBP10.48□□□□□ -0.73
CNOT4-212ENST00000541284 HHIPL2Q6UWX4 724 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 GOLPH3Q9H4A6 298 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.48□□□□□ -0.73
CNOT4-212ENST00000541284 ATP8B3O60423 1300 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 H0YGN5 161 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms