RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CCER2I3L3R5 266 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 NUAK1O60285 661 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 DPEP1P16444 411 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 KCNA3P22001 575 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 GALK1P51570 392 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 HDLBPQ00341 1268 aaKnown RBP8.13□□□□□ -1.11
TTR-203ENST00000541025 CALD1Q05682 793 aaKnown RBP8.13□□□□□ -1.11
TTR-203ENST00000541025 GPR162Q16538 588 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 ANKRD39Q53RE8 183 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 ZPBP2Q6X784 338 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 TM9SF2Q99805 663 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 KRTAP4-7Q9BYR0 210 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 PCDHGB7Q9Y5F8 929 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 DICER1Q9UPY3 1922 aaKnown RBP8.13□□□□□ -1.11
TTR-203ENST00000541025 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
TTR-203ENST00000541025 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 TIAM2Q8IVF5 1701 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 IL16Q14005 1332 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 UBN2Q6ZU65 1347 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 ZNF521Q96K83 1311 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 FANCIQ9NVI1 1328 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
TTR-203ENST00000541025 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 ZNF205O95201 554 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 GSNP06396 782 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 HOXB7P09629 217 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 VAV1P15498 845 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 CHRNA5P30532 468 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 PMS1P54277 932 aaKnown RBP8.12□□□□□ -1.11
TTR-203ENST00000541025 TGFB2P61812 414 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 RACK1P63244 317 aaKnown RBP8.12□□□□□ -1.11
TTR-203ENST00000541025 PRR5LQ6MZQ0 368 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 CLEC4GQ6UXB4 293 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
TTR-203ENST00000541025 FERD3LQ96RJ6 166 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 GCM1Q9NP62 436 aa8.12□□□□□ -1.11
TTR-203ENST00000541025 DDX21Q9NR30 783 aaKnown RBP eCLIP8.12□□□□□ -1.11
TTR-203ENST00000541025 ERVV-1B6SEH8 477 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 ABLIM1O14639 778 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 EFEMP2O95967 443 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 ACRP10323 421 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 GPTP24298 496 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 AIMP1Q12904 312 aaKnown RBP8.11□□□□□ -1.11
TTR-203ENST00000541025 LAPTM5Q13571 262 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 LCE4AQ5TA78 99 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 KIF6Q6ZMV9 814 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 RAPGEFL1Q9UHV5 662 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 DDX41Q9UJV9 622 aaKnown RBP8.11□□□□□ -1.11
TTR-203ENST00000541025 CNOT6Q9ULM6 557 aaKnown RBP8.11□□□□□ -1.11
TTR-203ENST00000541025 NIP7Q9Y221 180 aaKnown RBP eCLIP8.11□□□□□ -1.11
TTR-203ENST00000541025 ZNF652Q9Y2D9 606 aa8.11□□□□□ -1.11
TTR-203ENST00000541025 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 MEIS1O00470 390 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 TCERG1O14776 1098 aaKnown RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 CTSKP43235 329 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 YBX1P67809 324 aaKnown RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 COL9A2Q14055 689 aaPredicted RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 HSF5Q4G112 596 aaPredicted RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 ZNF385BQ569K4 471 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 ZNF34Q8IZ26 560 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 CDADC1Q9BWV3 514 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 SGPP1Q9BX95 441 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 IRF2BPLQ9H1B7 796 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 SIRT5Q9NXA8 310 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 DBF4Q9UBU7 674 aaPredicted RBP8.1□□□□□ -1.11
TTR-203ENST00000541025 COL4A1P02462 1669 aa8.1□□□□□ -1.11
TTR-203ENST00000541025 C9IYK1 514 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 MPOP05164 745 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 ARL4AP40617 200 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
TTR-203ENST00000541025 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
TTR-203ENST00000541025 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
TTR-203ENST00000541025 NT5DC4Q86YG4 428 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 PLCD4Q9BRC7 762 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 DSCC1Q9BVC3 393 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 ERVK13-1Q9NX77 482 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 ACSL6Q9UKU0 697 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
TTR-203ENST00000541025 NTSR2O95665 410 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 NOL9Q5SY16 702 aaKnown RBP8.08□□□□□ -1.12
TTR-203ENST00000541025 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
TTR-203ENST00000541025 TTLL10Q6ZVT0 673 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 G2E3Q7L622 706 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 C2CD5Q86YS7 1000 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 SPATA32Q96LK8 384 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 BRIP1Q9BX63 1249 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 HYPKQ9NX55 129 aa8.08□□□□□ -1.12
TTR-203ENST00000541025 MBD1Q9UIS9 605 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms