RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 IFNKQ9P0W0 207 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 NFE2L3Q9Y4A8 694 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 RBM47A0AV96 593 aaKnown RBP13.93□□□□□ -0.18
SMAD3-204ENST00000540846 B4DLN1 442 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 MAFGO15525 162 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 ARIH2O95376 493 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 CYP2B6P20813 491 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 PTGS1P23219 599 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 HYIQ5T013 277 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
SMAD3-204ENST00000540846 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 RIT2Q99578 217 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 C7orf25Q9BPX7 421 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 KCNF1Q9H3M0 494 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 BCAS3Q9H6U6 928 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 SLC5A4Q9NY91 659 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 PCDHA12Q9UN75 941 aa13.93□□□□□ -0.18
SMAD3-204ENST00000540846 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 MARCH6O60337 910 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 AMPD3Q01432 767 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 PPP2R5CQ13362 524 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 IRF5Q13568 498 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 KIF22Q14807 665 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 GNPTABQ3T906 1256 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 LRCH2Q5VUJ6 765 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 SPATA1Q5VX52 437 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 NLRX1Q86UT6 975 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 SMYD4Q8IYR2 804 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-204ENST00000540846 TRIB2Q92519 343 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 ERO1AQ96HE7 468 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 MPHOSPH6Q99547 160 aaKnown RBP13.92□□□□□ -0.18
SMAD3-204ENST00000540846 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 PDGFCQ9NRA1 345 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 SRRDQ9UH36 339 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 UBA1P22314 1058 aaKnown RBP13.92□□□□□ -0.18
SMAD3-204ENST00000540846 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 CNNM4Q6P4Q7 775 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 SEPT14Q6ZU15 432 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
SMAD3-204ENST00000540846 RAD54LQ92698 747 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 CDHR1Q96JP9 859 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 SENP7Q9BQF6 1050 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 GTPBP4Q9BZE4 634 aaKnown RBP13.92□□□□□ -0.18
SMAD3-204ENST00000540846 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 NRBP1Q9UHY1 535 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 TELO2Q9Y4R8 837 aa13.92□□□□□ -0.18
SMAD3-204ENST00000540846 NFASCO94856 1347 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 EML1O00423 815 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 ADCY6O43306 1168 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 CCNE2O96020 404 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 GNRH1P01148 92 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 TGFB3P10600 412 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 CYP2C19P33261 490 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 CDKAL1Q5VV42 579 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 KLHL10Q6JEL2 608 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 GIMAP8Q8ND71 665 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-204ENST00000540846 NT5C3AQ9H0P0 336 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 UNC45AQ9H3U1 944 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 ABHD16BQ9H3Z7 469 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
SMAD3-204ENST00000540846 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 RWDD2AQ9UIY3 292 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 DDX41Q9UJV9 622 aaKnown RBP13.91□□□□□ -0.18
SMAD3-204ENST00000540846 CTNND2Q9UQB3 1225 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 GDAQ9Y2T3 454 aa13.91□□□□□ -0.18
SMAD3-204ENST00000540846 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 GAS7O60861 476 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 SERPINC1P01008 464 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF865P0CJ78 1059 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-204ENST00000540846 ASIC1P78348 528 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 PAK1Q13153 545 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 ACVR2BQ13705 512 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 SCFD2Q8WU76 684 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
SMAD3-204ENST00000540846 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 TEKT3Q9BXF9 490 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 FRMPD3Q5JV73 1810 aa13.9□□□□□ -0.18
SMAD3-204ENST00000540846 LOXHD1Q8IVV2 1947 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-204ENST00000540846 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
SMAD3-204ENST00000540846 UBASH3AP57075 661 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 GSDMDP57764 484 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 MCM6Q14566 821 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms