RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 PGBD4Q96DM1 585 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 ALPK1Q96QP1 1244 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SERINC2Q96SA4 455 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 HAUS7Q99871 368 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 ISCA1Q9BUE6 129 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 NSUN3Q9H649 340 aaKnown RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 DNM3Q9UQ16 869 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 CAPN6Q9Y6Q1 641 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 ZNF891A8MT65 544 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-209ENST00000540819 ZBED1O96006 694 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 HRGP04196 525 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 C1QTNF9P0C862 333 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 AKAP5P24588 427 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 GRK6P43250 576 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
PRKDC-209ENST00000540819 IFIT1BQ5T764 474 aaKnown RBP6.47□□□□□ -1.37
PRKDC-209ENST00000540819 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 PGM2L1Q6PCE3 622 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 C11orf74Q86VG3 221 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 SKAP1Q86WV1 359 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 NAXEQ8NCW5 288 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 ABHD4Q8TB40 342 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 XAGE3Q8WTP9 111 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 TRIM63Q969Q1 353 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 PKNOX2Q96KN3 472 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 SGCZQ96LD1 299 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 PPM1MQ96MI6 270 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 TAAR9Q96RI9 348 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRKDC-209ENST00000540819 FAM204AQ9H8W3 233 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 RASSF1Q9NS23 344 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 MKS1Q9NXB0 559 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 SLAMF8Q9P0V8 285 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 SAMD15Q9P1V8 674 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 ST14Q9Y5Y6 855 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 CNTNAP4Q9C0A0 1308 aa6.47□□□□□ -1.37
PRKDC-209ENST00000540819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 BICDL2A1A5D9 508 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 hCG_1984214I3L0E3 225 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 J3KRW8 73 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 CBX4O00257 560 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 TPP1O14773 563 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ORC4O43929 436 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 DLX3O60479 287 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 GAS7O60861 476 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 CST3P01034 146 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 KIR3DL1P43629 444 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 RXRGP48443 463 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 TERF1P54274 439 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 SESN3P58005 492 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 TRIM14Q14142 442 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ODF1Q14990 250 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 NKG7Q16617 165 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ALDH1L2Q3SY69 923 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 PPFIBP1Q86W92 1011 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 NXPE1Q8N323 547 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ZNF513Q8N8E2 541 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 GIMAP8Q8ND71 665 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 BVESQ8NE79 360 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 GCC1Q96CN9 775 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 CCDC138Q96M89 665 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 RNF38Q9H0F5 515 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 KLHL25Q9H0H3 589 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 EMC7Q9NPA0 242 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 DCP1AQ9NPI6 582 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-209ENST00000540819 C19orf73Q9NVV2 129 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 APEX2Q9UBZ4 518 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 KLHL3Q9UH77 587 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 SLC45A1Q9Y2W3 748 aa6.46□□□□□ -1.38
PRKDC-209ENST00000540819 A0A1B0GVC2 190 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 NOP56O00567 594 aaKnown RBP6.45□□□□□ -1.38
PRKDC-209ENST00000540819 AP1G1O43747 822 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 OFD1O75665 1012 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 NAT1P18440 290 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 MAPK9P45984 424 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 PRAMEF13Q5VWM6 474 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 CDH24Q86UP0 819 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 CILP2Q8IUL8 1156 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 SLC41A1Q8IVJ1 513 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 CRACR2BQ8N4Y2 399 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-209ENST00000540819 DEPTORQ8TB45 409 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 KCTD13Q8WZ19 329 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 FAM193BQ96PV7 902 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-209ENST00000540819 CRB3Q9BUF7 120 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 GBP3Q9H0R5 595 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 EPB41L4BQ9H329 900 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 RSAD1Q9HA92 442 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 VTA1Q9NP79 307 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 FNIP2Q9P278 1114 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 ZKSCAN5Q9Y2L8 839 aa6.45□□□□□ -1.38
PRKDC-209ENST00000540819 A0A1W2PRQ8 180 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 TRIM75PA6NK02 468 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 AQP7O14520 342 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 CRTAMO95727 393 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms