RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 NOP56O00567 594 aaKnown RBP12.97□□□□□ -0.33
SNHG1-206ENST00000537925 DHX15O43143 795 aaKnown RBP12.97□□□□□ -0.33
SNHG1-206ENST00000537925 F2P00734 622 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 GUCY1B3Q02153 619 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 Q4G0T1 1027 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 PRR16Q569H4 304 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 PIK3AP1Q6ZUJ8 805 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 FAM126BQ8IXS8 530 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 PRIMPOLQ96LW4 560 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 SDF4Q9BRK5 362 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
SNHG1-206ENST00000537925 GSTTP1A0A1W2PQM5 241 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 FAM205CA6NFA0 338 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 H0YGN5 161 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 DYNC1I1O14576 645 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.34
SNHG1-206ENST00000537925 TDP2O95551 362 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 CD4P01730 458 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 LGALS2P05162 132 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 ZNF286BP0CG31 522 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 FAAP100Q0VG06 881 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.34
SNHG1-206ENST00000537925 PPP4R3AQ6IN85 833 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 NEK8Q86SG6 692 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 SEPT1Q8WYJ6 367 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 MAP7D2Q96T17 732 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 JPH1Q9HDC5 661 aaPredicted RBP12.96□□□□□ -0.34
SNHG1-206ENST00000537925 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 SLC9A2Q9UBY0 812 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 TANC1Q9C0D5 1861 aa12.96□□□□□ -0.34
SNHG1-206ENST00000537925 DCDC2CA8MYV0 355 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 MSH4O15457 936 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 CLTBP09497 229 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 CDC25BP30305 580 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 TCF7P36402 384 aaPredicted RBP12.95□□□□□ -0.34
SNHG1-206ENST00000537925 PSEN2P49810 448 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 SP4Q02446 784 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 PTPN11Q06124 597 aaPredicted RBP12.95□□□□□ -0.34
SNHG1-206ENST00000537925 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 SESTD1Q86VW0 696 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 ZNF577Q9BSK1 485 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 KATNAL1Q9BW62 490 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
SNHG1-206ENST00000537925 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
SNHG1-206ENST00000537925 EVPLQ92817 2033 aa12.95□□□□□ -0.34
SNHG1-206ENST00000537925 SCN5AQ14524 2016 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 RANBP2P49792 3224 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 A0A1W2PQ27 194 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 A0A1W2PQ64 194 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 A0A1W2PQD8 194 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 H3BRB1 525 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 KIAA0355O15063 1070 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 NR1I2O75469 434 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 ATG7O95352 703 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 CCNE2O96020 404 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 ACTR2P61160 394 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 MFSD10Q14728 455 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.342e-19■■■■■ 32.2
SNHG1-206ENST00000537925 KIAA0753Q2KHM9 967 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 ETNPPLQ8TBG4 499 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 SLC5A5Q92911 643 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 UIMC1Q96RL1 719 aa12.94□□□□□ -0.34
SNHG1-206ENST00000537925 NAP1L4Q99733 375 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
SNHG1-206ENST00000537925 EMSYQ7Z589 1322 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 LOXHD1Q8IVV2 1947 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 TLR3O15455 904 aaKnown RBP12.93□□□□□ -0.34
SNHG1-206ENST00000537925 AP5Z1O43299 807 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 SLC37A4O43826 429 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 B4GALT4O60513 344 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 LGR5O75473 907 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 SYN1P17600 705 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.341e-8■■■□□ 19
SNHG1-206ENST00000537925 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
SNHG1-206ENST00000537925 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 TRIM50Q86XT4 487 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 PPP1R13LQ8WUF5 828 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
SNHG1-206ENST00000537925 RIT2Q99578 217 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 CBX8Q9HC52 389 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 KCNMB3Q9NPA1 279 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
SNHG1-206ENST00000537925 IGKV6D-21A0A0A0MT36 114 aa12.92□□□□□ -0.34
SNHG1-206ENST00000537925 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
SNHG1-206ENST00000537925 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
SNHG1-206ENST00000537925 YEATS4O95619 227 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms