RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 SYCP1Q15431 976 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 VWA3BQ502W6 1294 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 DLK2Q6UY11 383 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 C1orf186Q6ZWK4 172 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 NELFCDQ8IXH7 590 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 LXNQ9BS40 222 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 CAPN11Q9UMQ6 739 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 TUBB4AP04350 444 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 KRT9P35527 623 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 BMT2Q1RMZ1 405 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 PPP4R3CPQ6ZMV5 832 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 NACC1Q96RE7 527 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 DNAJC7Q99615 494 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 PKD2L1Q9P0L9 805 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 A0A0G2JMZ2 1700 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 GOLGA6L9A6NEM1 432 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 RASSF10A6NK89 507 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 SPDYE16A6NNV3 312 aaPredicted RBP25.13■■□□□ 1.61
HMGA2-206ENST00000536545 GAP43P17677 238 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 ERVK-24P63145 666 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 MAP3K9P80192 1104 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 BAATQ14032 418 aaPredicted RBP25.13■■□□□ 1.61
HMGA2-206ENST00000536545 EDRF1Q3B7T1 1238 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 FKBP15Q5T1M5 1219 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 RETREG2Q8NC44 543 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 RBM46Q8TBY0 533 aaKnown RBP25.13■■□□□ 1.61
HMGA2-206ENST00000536545 ZNF592Q92610 1267 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 DCPSQ96C86 337 aaKnown RBP25.13■■□□□ 1.61
HMGA2-206ENST00000536545 DESI2Q9BSY9 194 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 OLFML3Q9NRN5 406 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 COL4A3BPQ9Y5P4 624 aa25.13■■□□□ 1.61
HMGA2-206ENST00000536545 DDX39AO00148 427 aaKnown RBP25.12■■□□□ 1.61
HMGA2-206ENST00000536545 C9orf131Q5VYM1 1079 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 XRRA1Q6P2D8 792 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 MIER3Q7Z3K6 550 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 TMTC1Q8IUR5 882 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 SULF1Q8IWU6 871 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 PURBQ96QR8 312 aaKnown RBP25.12■■□□□ 1.61
HMGA2-206ENST00000536545 NUP58Q9BVL2 599 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 TEX13BQ9BXU2 312 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 NDST4Q9H3R1 872 aa25.12■■□□□ 1.61
HMGA2-206ENST00000536545 TRAF5O00463 557 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 ZBTB39O15060 712 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 HOXD13P35453 343 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 KLK7P49862 253 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 FIGNQ5HY92 759 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 ARHGEF16Q5VV41 709 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 TRIM65Q6PJ69 517 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 BANK1Q8NDB2 785 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 KIF18AQ8NI77 898 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 KCND2Q9NZV8 630 aa25.11■■□□□ 1.61
HMGA2-206ENST00000536545 DYNC1I1O14576 645 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 MYBP10242 640 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 MARSP56192 900 aaKnown RBP25.1■■□□□ 1.61
HMGA2-206ENST00000536545 CYP26C1Q6V0L0 522 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 SIK3Q9Y2K2 1263 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 LUC7L2Q9Y383 392 aaKnown RBP25.1■■□□□ 1.61
HMGA2-206ENST00000536545 ADGRG1Q9Y653 693 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 CCDC175P0C221 793 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 ETF1P62495 437 aaKnown RBP25.1■■□□□ 1.61
HMGA2-206ENST00000536545 TBC1D22BQ9NU19 505 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 TRAF3IP3Q9Y228 551 aa25.1■■□□□ 1.61
HMGA2-206ENST00000536545 A0A1W2PQJ5 194 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 GNA14O95837 355 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 MYCLP12524 364 aaPredicted RBP25.09■■□□□ 1.61
HMGA2-206ENST00000536545 ZNF131P52739 623 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 KNOP1Q1ED39 458 aaKnown RBP25.09■■□□□ 1.61
HMGA2-206ENST00000536545 OR8K1Q8NGG5 319 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 IQCDQ96DY2 449 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 MAF1Q9H063 256 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 BCAS3Q9H6U6 928 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 HOXC10Q9NYD6 342 aa25.09■■□□□ 1.61
HMGA2-206ENST00000536545 PHLPP2Q6ZVD8 1323 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 FAM13AO94988 1023 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 P4HBP07237 508 aaKnown RBP25.08■■□□□ 1.61
HMGA2-206ENST00000536545 TRIM21P19474 475 aaKnown RBP25.08■■□□□ 1.61
HMGA2-206ENST00000536545 CCND2P30279 289 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 SYT10Q6XYQ8 523 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 L3MBTL3Q96JM7 780 aaPredicted RBP25.08■■□□□ 1.61
HMGA2-206ENST00000536545 ACAD9Q9H845 621 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 MRPL44Q9H9J2 332 aaKnown RBP25.08■■□□□ 1.61
HMGA2-206ENST00000536545 CSADQ9Y600 493 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 LCTP09848 1927 aa25.08■■□□□ 1.61
HMGA2-206ENST00000536545 GUCY2CP25092 1073 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 MEA1Q16626 185 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 CCDC40Q4G0X9 1142 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 VSIG10LQ86VR7 867 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 ZSWIM4Q9H7M6 989 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 ODF2LQ9ULJ1 636 aa25.08■■□□□ 1.6
HMGA2-206ENST00000536545 EIF3DO15371 548 aaKnown RBP eCLIP25.07■■□□□ 1.6
HMGA2-206ENST00000536545 PPP1R12BO60237 982 aaPredicted RBP25.07■■□□□ 1.6
HMGA2-206ENST00000536545 LYPLA2O95372 231 aa25.07■■□□□ 1.6
HMGA2-206ENST00000536545 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
HMGA2-206ENST00000536545 PARVGQ9HBI0 331 aa25.07■■□□□ 1.6
HMGA2-206ENST00000536545 A1CFQ9NQ94 594 aaKnown RBP25.07■■□□□ 1.6
HMGA2-206ENST00000536545 CYP39A1Q9NYL5 469 aa25.07■■□□□ 1.6
HMGA2-206ENST00000536545 SEL1LQ9UBV2 794 aa25.07■■□□□ 1.6
HMGA2-206ENST00000536545 ASTN1O14525 1302 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 ARHGEF35A5YM69 484 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 PDXKO00764 312 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms