RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 BMP6P22004 513 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 TFAP4Q01664 338 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 PPARAQ07869 468 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 KCTD2Q14681 263 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 ARRDC4Q8NCT1 418 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 ZNF287Q9HBT7 754 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
CHRNB1-202ENST00000536404 CTAGE15A4D2H0 777 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 MFAP3LO75121 409 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 TTLL1O95922 423 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 GYS2P54840 703 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CTDSPL2Q05D32 466 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 ZKSCAN8Q15776 578 aaPredicted RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 SLFN13Q68D06 897 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CTAGE6Q86UF2 777 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 BTBD18B2RXH4 712 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 ZBED4O75132 1171 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 SASH3O75995 380 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 COPB2P35606 906 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CORO7P57737 925 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 RTP1P59025 263 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 SETQ01105 290 aaPredicted RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 LRRC41Q15345 812 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CDKAL1Q5VV42 579 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 RPGRIP1Q96KN7 1286 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 TINF2Q9BSI4 451 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 ADD3Q9UEY8 706 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 ADAM21Q9UKJ8 722 aa12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHRNB1-202ENST00000536404 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 FANCGO15287 622 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 CALM1P0DP23 149 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 CALM2P0DP24 149 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 CALM3P0DP25 149 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 PBX1P40424 430 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 ADCYAP1R1P41586 468 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 SLC39A5Q6ZMH5 540 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 EHBP1Q8NDI1 1231 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 SLC38A10Q9HBR0 1119 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
CHRNB1-202ENST00000536404 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 NMT2O60551 498 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 BMP3P12645 472 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 KRT2P35908 639 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 RBL2Q08999 1139 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 CUL4BQ13620 913 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 LENG1Q96BZ8 264 aaPredicted RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 UBAC1Q9BSL1 405 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CHRNB1-202ENST00000536404 DNAJC25-GNG10A0A024R161 153 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 EIF3CLB5ME19 914 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 ATP2A1O14983 1001 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 SNAI1O95863 264 aaPredicted RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 PGK1P00558 417 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms